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sw_12_scaffold_783

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_783_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..1664)
DNA (1662bp) protein (554aa)
Parallel beta-helix repeat (Two copies) {ECO:0000313|EMBL:KCZ72236.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Met
hypothetical protein id=24615246 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
carbohydrate binding family 6
sw_12_scaffold_783_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2020..3210)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C248_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:EYR64346.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein rbh
sw_12_scaffold_783_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3645..4643)
DNA (999bp) protein (333aa)
gapB; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00559}; Short=GAPDH {ECO:0000255|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00559};; NAD(P)-dependent glyceraldeh
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=G3P_NATPD
sw_12_scaffold_783_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4686..5099)
DNA (414bp) protein (138aa)
JAMM domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ8_NATPD
hypothetical protein
Metalloprotease JAMM1, desampylating {ECO:0000313|EMBL:CAI48122.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_12_scaffold_783_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5096..6010)
DNA (915bp) protein (305aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate iron/cobalamin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR1_NATM8
ABC-type transport system periplasmic substrate-binding protein (probable substrate iron/cobalamin)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate iron/cobalamin) {ECO:0000313|EMBL:CCQ35572.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
sw_12_scaffold_783_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6235..8475)
DNA (2241bp) protein (747aa)
PAS/PAC sensor protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CMK6_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:ELZ24476.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
PAS/PAC sensor protein
sw_12_scaffold_783_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9014..9535)
DNA (522bp) protein (174aa)
amzA; archaemetzincin (EC:3.4.-.-)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Archaemetzincin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY4_NATM8
sw_12_scaffold_783_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9575..9964
DNA (390bp) protein (130aa)
UPF0146 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITQ6_NATPD
hypothetical protein
UPF0146 protein NP_0772A {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_12_scaffold_783_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9961..10824
DNA (864bp) protein (288aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK43_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ35231.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_12_scaffold_783_10
unknown

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10821..11021
DNA (201bp) protein (67aa)

This feature has no annotations

sw_12_scaffold_783_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11065..12225)
DNA (1161bp) protein (387aa)
Signal-transducing histidine kinase/response regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C0Q0_9EURY
Signal-transducing histidine kinase/response regulator {ECO:0000313|EMBL:ELZ16785.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source=
PAS domain-containing protein
sw_12_scaffold_783_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12498..13166
DNA (669bp) protein (223aa)
F420-dependent NADP reductase (EC:1.-.-.-)
F420H2:NADP oxidoreductase {ECO:0000313|EMBL:CAI48469.1}; EC=1.6.99.- {ECO:0000313|EMBL:CAI48469.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
F420H2:NADP+ oxidoreductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITR4_NATPD
sw_12_scaffold_783_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13225..14091)
DNA (867bp) protein (289aa)
ABC-type transport system permease protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITR9_NATPD
abc27p; ABC-type transport system permease protein
ABC-type transport system permease protein {ECO:0000313|EMBL:CAI48464.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_12_scaffold_783_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14127..15140)
DNA (1014bp) protein (338aa)
ABC-type transport system ATP-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITR8_NATPD
abc27a; ABC-type transport system ATP-binding protein
ABC-type transport system ATP-binding protein {ECO:0000313|EMBL:CAI48465.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_12_scaffold_783_15
unknown

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comp(15194..16558)
DNA (1365bp) protein (455aa)

This feature has no annotations

sw_12_scaffold_783_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16742..18658
DNA (1917bp) protein (639aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX9_NATPD
hypothetical protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CAI50173.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_12_scaffold_783_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18655..19011)
DNA (357bp) protein (119aa)
Probable SepF protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR8_NATM8
sepF; probable SepF protein
Probable SepF protein {ECO:0000313|EMBL:CCQ35588.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_12_scaffold_783_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19152..19439
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJV6_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30646.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_12_scaffold_783_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19832..20311)
DNA (480bp) protein (160aa)
PUA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC0_NATPD
RNA-binding protein
PUA domain protein {ECO:0000313|EMBL:CAI48261.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_783_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20432..22075
DNA (1644bp) protein (548aa)
Signal-transducing histidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMX7_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:EMA46996.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
kinA1; signal-transducing histidine kinase-like protein
sw_12_scaffold_783_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22227..23072
DNA (846bp) protein (282aa)
l-threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3P0_9EURY
Threonine aldolase {ECO:0000313|EMBL:ELZ28779.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
sw_12_scaffold_783_22
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22996..23400)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20652 RepID=G7ECY2_9GAMM
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KGI77791.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleia
slr0686; hypothetical protein
sw_12_scaffold_783_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23517..23741)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:CCQ35468.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_783_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23768..24700
DNA (933bp) protein (311aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK90_NATM8
ArsR family transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CCQ35467.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
Displaying 24 items

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