ggKbase home page

sw_12_scaffold_923

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_923_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..880
DNA (879bp) protein (293aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
electron transfer flavoprotein subunit beta
sw_12_scaffold_923_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

881..2506
DNA (1626bp) protein (542aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_12_scaffold_923_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2499..4160
DNA (1662bp) protein (554aa)
Flavoprotein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W843_9EURY
flavoprotein
Flavoprotein {ECO:0000313|EMBL:AGN01478.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_12_scaffold_923_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4164..4550
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93005.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_923_5

Not on your lists

4616..5353
DNA (738bp) protein (246aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP75_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS04390.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
acetyltransferase
sw_12_scaffold_923_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5364..5525)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS69_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92838.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_923_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5642..6088)
DNA (447bp) protein (149aa)
DUF456 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNF5_NATM8
DUF456 family protein
DUF456 family protein {ECO:0000313|EMBL:CCQ35456.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_12_scaffold_923_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6202..8466)
DNA (2265bp) protein (755aa)
tmcA; tRNA(Met) cytidine acetyltransferase (EC:2.3.1.193)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRJ5_NATM8
sw_12_scaffold_923_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8785..9051
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=EF1B_NATPD
ef1B; elongation factor 1-beta
Elongation factor 1-beta {ECO:0000255|HAMAP-Rule:MF_00043}; Short=EF-1-beta {ECO:0000255|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000255|HAMAP-Rule:MF_00043}; TaxID=348780 species="Archaea; Euryarchaeot
sw_12_scaffold_923_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9227..9520
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL21_NATPD
rpl21R; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_12_scaffold_923_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9517..9873
DNA (357bp) protein (119aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:CAI49932.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI49932.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD
sw_12_scaffold_923_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9929..10504
DNA (576bp) protein (192aa)
Putative tRNA-specific adenosine deaminase {ECO:0000313|EMBL:CAI49931.1}; EC=3.5.4.- {ECO:0000313|EMBL:CAI49931.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Putative tRNA-specific adenosine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL9_NATPD
hypothetical protein
sw_12_scaffold_923_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10516..11385
DNA (870bp) protein (290aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RSMA_NATPD
ksgA; dimethyladenosine transferase
sw_12_scaffold_923_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11495..12763
DNA (1269bp) protein (423aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD
msc_5; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
Displaying 14 items

View Taxonomy