ggKbase home page

sw_12_scaffold_1283_6

Organism: SW_12_Halobacteriales_69_24

partial RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 27 / 38 MC: 1
Location: 2821..3342

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 172.0
  • Bit_score: 292
  • Evalue 3.70e-76
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 172.0
  • Bit_score: 292
  • Evalue 5.10e-76
rps4p; 30S ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 172.0
  • Bit_score: 256
  • Evalue 4.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGGCGCTCGGTAGCAACACCAAGTTCTACGAGACGCCCAACCATCCCTACCAGGGCGAACGCATCAGCGAGGAGGCCGGCCTCATCGGCCAGTACGGCCTCAAGAACAAGGAGGAACTCTGGCGGGCCCGCTCGGAACTGCGGGCATACCGCCGCGAGGCGCGGAAACTGCTCGGCCAGGTCGACAGCGAGGAGGTCGACCGCGAGACCGAGGAGTTCCTCGCGCGCCTCAAGCGTATCGGCGTGCTCGGCGAGAACGACTCGCTCGACGACATCCTGTCGCTGGACGTGACGGACATCCTCGAACGGCGCCTGCAGACCGTGGTCTACCGGAAGGGGCTGGCCAACACGACCAGCCAGGCGCGGCAGTTCGTCGCTCACGGCCACATCACCGTCGACGGCCGGCGGGTGACACGCTCGTCGAGGAAGGTGGCCGCCGCCGAGGAGGACGCCGTCGCGTTCGACTCGGCCAGCCCGCTGACAGACGAACTCCATCCCGAACGCGCGGAGGACAACCAATGA
PROTEIN sequence
Length: 174
MALGSNTKFYETPNHPYQGERISEEAGLIGQYGLKNKEELWRARSELRAYRREARKLLGQVDSEEVDRETEEFLARLKRIGVLGENDSLDDILSLDVTDILERRLQTVVYRKGLANTTSQARQFVAHGHITVDGRRVTRSSRKVAAAEEDAVAFDSASPLTDELHPERAEDNQ*