ggKbase home page

sw_12_scaffold_1283

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1283_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(397..684)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25575.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_1283_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

809..1075
DNA (267bp) protein (89aa)
Homolog to antitoxin VapB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPB5_NATM8
homolog to antitoxin VapB
Homolog to antitoxin VapB {ECO:0000313|EMBL:CCQ35878.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_12_scaffold_1283_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1075..1503
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPH0_NATM8
homolog to endonuclease VapC
sw_12_scaffold_1283_4
unknown

Not on your lists

comp(1505..1951)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_12_scaffold_1283_trna_1
unknown

Not on your lists

2191..2275
DNA (85bp)
transferRNA
sw_12_scaffold_1283_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2291..2821
DNA (531bp) protein (177aa)
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis
sw_12_scaffold_1283_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2821..3342
DNA (522bp) protein (174aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
sw_12_scaffold_1283_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3339..3728
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11
sw_12_scaffold_1283_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3731..4546
DNA (816bp) protein (272aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
sw_12_scaffold_1283_trna_2
unknown

Not on your lists

4742..4826
DNA (85bp)
transferRNA
sw_12_scaffold_1283_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4836..5186
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L18
sw_12_scaffold_1283_10
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5183..5635
DNA (453bp) protein (151aa)
50S ribosomal protein L13 n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BBQ1_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 1462
ribosomal protein L13, archaeal/eukaryotic
sw_12_scaffold_1283_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5629..5820
DNA (192bp) protein (64aa)
30S ribosomal protein S9 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT60_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
archaeal ribosomal protein S9P
Displaying 13 items

View Taxonomy