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sw_12_scaffold_2605

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2605_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..575)
DNA (573bp) protein (191aa)
hpcEa; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase id=24646463 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) {ECO:0000313|EMBL:ERH10638.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
sw_12_scaffold_2605_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(643..1428)
DNA (786bp) protein (262aa)
ABC-type transport system permease protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD2_NATPD
abc28p; ABC-type transport system permease protein
ABC-type transport system permease protein {ECO:0000313|EMBL:CAI49311.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_12_scaffold_2605_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1425..2372)
DNA (948bp) protein (316aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWS9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA49294.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
ABC transporter
sw_12_scaffold_2605_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2427..2660)
DNA (234bp) protein (78aa)
Putative selenoprotein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMZ9_9EURY
Putative selenoprotein {ECO:0000313|EMBL:EMA23752.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM
selenoprotein
sw_12_scaffold_2605_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2804..4174)
DNA (1371bp) protein (457aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0B1_HALMD
protoheme IX farnesyltransferase
sw_12_scaffold_2605_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4242..4709)
DNA (468bp) protein (156aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:ERH10346.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
btuD; ABC-type vitamin B12 transporter, ATP-binding component BtuD id=24649253 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
btuD; ABC-type vitamin B12 transporter, ATP-binding component BtuD
sw_12_scaffold_2605_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5260..5775)
DNA (516bp) protein (172aa)
ABC-type transport system permease protein (Probable substrate cobalamin) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) PF2_NATPD">RepID=Q3IPF2_NATPD
btuC; corrinoid ABC transporter permease
ABC-type transport system permease protein (Probable substrate cobalamin) {ECO:0000313|EMBL:CAI49999.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Displaying 7 items

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