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sw_12_scaffold_2909

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2909_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..813)
DNA (813bp) protein (271aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBZ8_HALJP
flap endonuclease-1
sw_12_scaffold_2909_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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920..1750
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 PF46_9EURY">RepID=U1PF46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_2909_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1780..2310)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000365215F
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AKH97574.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum s
N-acetyltransferase GCN5
sw_12_scaffold_2909_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2467..2670)
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V5T4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45118.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_12_scaffold_2909_5
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3488..3724
DNA (237bp) protein (79aa)
Ornithine cyclodeaminase n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BT82_NATSJ
Ornithine cyclodeaminase
Ornithine cyclodeaminase {ECO:0000313|EMBL:AFO56030.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_12_scaffold_2909_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3726..4856)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_2909_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4928..5152)
DNA (225bp) protein (75aa)
tRNA/rRNA pseudouridine synthase complex protein Gar1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSD5_NATM8
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
tRNA/rRNA pseudouridine synthase complex protein Gar1 {ECO:0000313|EMBL:CCQ37237.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sour
sw_12_scaffold_2909_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5149..5364)
DNA (216bp) protein (72aa)
Signal recognition particle 19 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP19_NATPD
srp19; signal recognition particle 19K protein
Signal recognition particle 19 kDa protein {ECO:0000255|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000255|HAMAP-Rule:MF_00305};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_12_scaffold_2909_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5426..5758
DNA (333bp) protein (111aa)
hypothetical protein id=24648994 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10129.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_2909_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5895..6704)
DNA (810bp) protein (270aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE92_9EURY
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_12_scaffold_2909_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7464..8726)
DNA (1263bp) protein (421aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase beta chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJ87_HALJP
tryptophan synthase subunit beta
sw_12_scaffold_2909_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8723..9490)
DNA (768bp) protein (256aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=1227455 species="Archaea; E
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFU3_9EURY
sw_12_scaffold_2909_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9538..10272)
DNA (735bp) protein (245aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIX9_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10064.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
methyltransferase type 11
sw_12_scaffold_2909_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10403..10636)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TVR6_9EURY
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:GAD51851.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_2909_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10633..11220)
DNA (588bp) protein (196aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YDU1_9EURY
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:GAD51851.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
putrescine/spermidine ABC transporter permease component
Displaying 15 items

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