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sw_12_scaffold_2950

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2950_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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64..435
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036DF463
Uncharacterized protein {ECO:0000313|EMBL:ELZ27734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_2950_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(610..906)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JP00_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10872.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_2950_3
unknown

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934..1302
DNA (369bp) protein (123aa)

This feature has no annotations

sw_12_scaffold_2950_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1295..1969
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_2950_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1999..2271)
DNA (273bp) protein (91aa)
Putative RNA methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPU7_9EURY
Putative RNA methylase {ECO:0000313|EMBL:ELZ24412.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA methyltransferase
sw_12_scaffold_2950_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2625..3173)
DNA (549bp) protein (183aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX5 RepID=U1MHN6_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERG88839.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
type 11 methyltransferase
sw_12_scaffold_2950_7
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3235..4098)
DNA (864bp) protein (288aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HGR8_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ82274.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JC
sw_12_scaffold_2950_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4247..6172
DNA (1926bp) protein (642aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSW0_HALTV
sw_12_scaffold_2950_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6183..6917
DNA (735bp) protein (245aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KG53_HALAR
Suspect SCG annotation. See neighboring gene [sw_12_scaffold_2950_8].
sw_12_scaffold_2950_10
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6921..7694
DNA (774bp) protein (258aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JC16_9EURY
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EMA05913.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
alpha/beta hydrolase fold protein
sw_12_scaffold_2950_trna_1
unknown

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comp(7734..7814)
DNA (81bp)
transferRNA
Displaying 11 items

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