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sw_12_scaffold_4480

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_4480_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..134
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8C2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00519.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_4480_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(149..856)
DNA (708bp) protein (236aa)
putative transporter id=24648086 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:ERH09213.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transporter
sw_12_scaffold_4480_3
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1176..1595
DNA (420bp) protein (140aa)
UspA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQQ8_NATM8
Universal stress protein {ECO:0000313|EMBL:AHG03421.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
UspA domain protein
sw_12_scaffold_4480_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1642..2613)
DNA (972bp) protein (324aa)
Transcription initiation factor IIB n=2 Tax=Halorhabdus RepID=C7NMT2_HALUD
Transcription factor TFIIB cyclin-related
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_12_scaffold_4480_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2792..3385
DNA (594bp) protein (198aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000313|EMBL:CCQ33263.1}; EC=3.1.26.4 {ECO:0000313|EMBL:CCQ33263.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;"
Ribonuclease H n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D087_9EURY
sw_12_scaffold_4480_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3378..4022
DNA (645bp) protein (215aa)
hypothetical protein id=24647768 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08896.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_4480_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4049..4378)
DNA (330bp) protein (110aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHG6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ22740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PadR family transcriptional regulator
Displaying 7 items

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