ggKbase home page

sw_12_scaffold_4890

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_4890_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..648
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERJ07456.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_12_scaffold_4890_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(820..2094)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecY n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPL5_9EURY
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=103380
sw_12_scaffold_4890_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2096..2593)
DNA (498bp) protein (166aa)
50S ribosomal protein L15P n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR4_9EURY
50S ribosomal protein L27Ae (L15p)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
sw_12_scaffold_4890_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2593..3009)
DNA (417bp) protein (139aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=24646827 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl30p; 50S ribosomal protein L30P
sw_12_scaffold_4890_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3006..3650)
DNA (645bp) protein (215aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=24646826 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SSU ribosomal protein S5P {ECO:0000313|EMBL:ERH10991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps5p; 30S ribosomal protein S5P
sw_12_scaffold_4890_6
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3647..4207)
DNA (561bp) protein (187aa)
50S ribosomal protein L18P n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=RL18_HALMA
rpl18p; 50S ribosomal protein L18
50S ribosomal protein L18; Hl12; Hmal18; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43049
sw_12_scaffold_4890_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4207..4656)
DNA (450bp) protein (150aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
rpl19e; 50S ribosomal protein L19
sw_12_scaffold_4890_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4653..5477)
DNA (825bp) protein (275aa)
Ribosomal protein L32e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D7_HALMD
50S ribosomal protein L32e
Ribosomal protein L32e {ECO:0000313|EMBL:ACV47959.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
Displaying 8 items

View Taxonomy