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sw_12_scaffold_2653

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2653_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..461)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J300_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15107.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_2653_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(593..949)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ21320.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ21320.1};; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
DNA-directed RNA polymerase subunit F n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CDI8_9EURY
RNA polymerase Rpb4
sw_12_scaffold_2653_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(946..1236)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X900_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;"
50S ribosomal protein L21
sw_12_scaffold_2653_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1305..1571)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UZX8_HALBP
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=469382
translation elongation factor aEF-1 beta
sw_12_scaffold_2653_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1573..1746)
DNA (174bp) protein (58aa)
Predicted Zn-ribbon RNA-binding protein with a function in translation n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A1G1_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:AKH98091.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarcha
hypothetical protein
sw_12_scaffold_2653_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1896..2807
DNA (912bp) protein (304aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT86_HALUD
ksgA; dimethyladenosine transferase
sw_12_scaffold_2653_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2815..3984
DNA (1170bp) protein (390aa)
MscS Mechanosensitive ion channel n=1 Tax=Halobacterium sp. DL1 RepID=G4IBG5_9EURY
Small mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:AHG04203.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="H
small-conductance mechanosensitive channel
Displaying 7 items

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