ggKbase home page

sw_12_scaffold_5344

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_5344_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1554)
DNA (1554bp) protein (518aa)
succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:CCQ34841.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CCQ34841.1};; Succinate dehydrogenase subunit A protein {ECO:0000313|EMBL:ERJ07083.1}; EC=1.3.
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIE8_9EURY
sw_12_scaffold_5344_2
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1602..2519)
DNA (918bp) protein (306aa)
sdhB; succinate dehydrogenase iron-sulfur protein subunit (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRN8_9EURY
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:ELZ13590.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;"
sw_12_scaffold_5344_3
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2516..2884)
DNA (369bp) protein (123aa)
Succinate dehydrogenase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW38_9EURY
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ELY74505.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3
succinate dehydrogenase, subunit D
sw_12_scaffold_5344_4

Not on your lists

comp(2885..3214)
DNA (330bp) protein (110aa)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ESS09564.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ESS09564.1};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63
Succinate dehydrogenase, cytochrome b556 subunit n=3 Tax=Archaea RepID=U1NWI4_9EURY
succinate dehydrogenase, cytochrome b556 subunit
sw_12_scaffold_5344_5
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3327..4277)
DNA (951bp) protein (317aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZPV9_9EURY
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ELY87587.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba h
succinylglutamate desuccinylase/aspartoacylase
sw_12_scaffold_5344_6
unknown

Not on your lists

4608..4703
DNA (96bp) protein (32aa)

This feature has no annotations

sw_12_scaffold_5344_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4714..5325)
DNA (612bp) protein (204aa)
3-methyladenine DNA glycosylase n=1 Tax=Halomicrobium katesii RepID=UPI0003628561
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ACV48183.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
sw_12_scaffold_5344_8

Not on your lists

comp(5374..6474)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH71_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06317.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_5344_9
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6481..7764)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BNA9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ11089.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_12_scaffold_5344_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8003..9361)
DNA (1359bp) protein (453aa)
Replication factor A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEM9_9EURY
Replication factor A {ECO:0000313|EMBL:EMA44181.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
OB-fold tRNA/helicase-type nucleic acid binding protein
sw_12_scaffold_5344_trna_1
unknown

Not on your lists

9549..9621
DNA (73bp)
transferRNA
sw_12_scaffold_5344_11
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10028..10324)
DNA (297bp) protein (99aa)
Transcriptional regulator, PadR family n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YF01_9EURY
Transcriptional regulator, PadR family {ECO:0000313|EMBL:GAD52496.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
hypothetical protein
sw_12_scaffold_5344_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10351..11292)
DNA (942bp) protein (314aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE2_9EURY
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ELZ22756.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
oxidoreductase molybdopterin binding
Displaying 13 items

View Taxonomy