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sw_12_scaffold_6063

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_6063_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..429)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HQV5_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67530.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_12_scaffold_6063_2
unknown

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comp(426..926)
DNA (501bp) protein (167aa)

This feature has no annotations

sw_12_scaffold_6063_3
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1079..1648)
DNA (570bp) protein (190aa)
Flagellin domain-containing protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AUW5_NATA1
Flagellin domain-containing protein {ECO:0000313|EMBL:ELZ01738.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (stra
hypothetical protein
sw_12_scaffold_6063_4
unknown

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comp(2005..2124)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_12_scaffold_6063_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2196..3110)
DNA (915bp) protein (305aa)
3-isopropylmalate dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS09_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:GAD51780.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
isocitrate/isopropylmalate dehydrogenase
sw_12_scaffold_6063_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3230..4105
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R037_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89931.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_6063_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4139..4498)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J834_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14147.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_6063_8
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4598..4936
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AKH97072.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AKH97072.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halan
Peptidyl-tRNA hydrolase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJA5_9EURY
peptidyl-tRNA hydrolase
sw_12_scaffold_6063_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4936..6087
DNA (1152bp) protein (384aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=24644592 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
tRNA pseudouridine synthase D TruD
sw_12_scaffold_6063_10

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6169..6363
DNA (195bp) protein (65aa)
Putative metal-binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZXD9_9ARCH
Putative metal-binding protein {ECO:0000313|EMBL:ESS07670.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
putative metal-binding protein
Displaying 10 items

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