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sw_12_scaffold_9734

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_9734_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..433
DNA (432bp) protein (144aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halogranum salarium B-1 RepID=J2ZZ07_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1210908 species="Arc
translation initiation factor 2 subunit gamma
sw_12_scaffold_9734_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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786..1355
DNA (570bp) protein (190aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EMA37067.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA37067.1};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU43_9EURY
sw_12_scaffold_9734_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1355..1555
DNA (201bp) protein (67aa)
Transcription elongation factor Spt4 n=2 Tax=Halobacteriaceae RepID=L0JJF8_NATP1
DNA-directed RNA polymerase subunit E, RpoE2
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_12_scaffold_9734_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1653..2033
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ24_9EURY
conserved hypothetical protein (DUF359)
UPF0218 protein HLRTI_000604 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
sw_12_scaffold_9734_5
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2108..2398
DNA (291bp) protein (97aa)
30S ribosomal protein S24e n=1 Tax=Natronococcus occultus SP4 RepID=L0K0R9_9EURY
ribosomal protein S24E
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus S
sw_12_scaffold_9734_6
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2398..2529
DNA (132bp) protein (44aa)
30S ribosomal protein S27ae n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P269_HALMD
30S ribosomal protein S27a
30S ribosomal protein S27ae {ECO:0000313|EMBL:AKH98448.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeu
sw_12_scaffold_9734_7
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2570..3415
DNA (846bp) protein (282aa)
gcp; O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=2 Tax=Halobacterium salinarum RepID=KAE1B_HALSA
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000255|HAMAP-Rule:MF_01447}; Includes:; tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01447
Displaying 7 items

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