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sw_12_scaffold_1710_2

Organism: SW_12_Halobacteriales_68_16

partial RP 27 / 55 MC: 7 BSCG 17 / 51 MC: 3 ASCG 18 / 38 MC: 2
Location: comp(362..1366)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 262.0
  • Bit_score: 314
  • Evalue 1.40e-82
tRNA pseudouridine synthase A n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLG1_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 262.0
  • Bit_score: 314
  • Evalue 1.00e-82
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 262.0
  • Bit_score: 314
  • Evalue 2.90e-83

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1005
ATGTATCTCCAACAGCGTCACTACGAGCAGTCCGCCACCCAGAGCGGCGAACCCGCGTCGAGCCCATACCGGGTCGATTTCCCCGCGAATACGTCGCATCGTGCGCCGGTAATCAACAGTACACCGTCGTCTGATATAAAGCTACGCCGGACTGCCAGCCCTGTGACCCCCGACACCGACAAGGTCGCCGGCGAGGGATGTACATCCGTGCGCGCTTTCCGTCTCGCCTACGACGGCGCTCCGTTTCACGGCTTCCAGCGCCAGCCCGACGTGCCAACCGTCGAGGATGCGCTGTTTGACGCGTTGTGCGCTCTCGGAGTCTGTACGGACGGACCCGAGAACTACTCCGCCGCCGGGCGTACCGATGCCGGCGTCTCCGCGGCTGCACAAACGGTCGCCTTCGACTGCCCCGAGTGGTGTGGCCCGGCGGCGCTGAACGCCGAACTCCCCGAGTCGATCCGCGCGTGGGCCGCCGCGGACGTGACGGACTTCCATGCCACGCACGACGCCCGCGGGCGCGAGTACGTCTACGTCCTCCCGGGAGTCGGTCTCGACGATGGCCGCGCCCGCGAGACAGCGGGACGCCTCTCCGGCGAACACGACTTCCACAATCTGACGCCCGACGGGACGGGGACGGTCCGTGACGTCTCAGTCGGCCTCGACCGGGACGGCGAGTTCCTCGCTGTCACCGTCCGGGCGGACGGATTTCCCCGCCAGCTCGTCCGCCGGCTCGTCTCGCTGCTGCGGTCGGTCGCGTCCGGGGCGGCGCCGCTCTCGAAGATCGGGGACGTGCTCGGTCCCGACCGGATCGAGGGGCCCGAGGGCGTCCCGCCGGCGCCGGCGTACCCGCTGTACCTCGCCGACGTCCGGTACGGGCTCTCCTTCACCGTTGCCCCCGGGGCGGCGGCGGATGCGAGGAAGCGCTTCGAGCGCCGCCGGACCGAACACGCGGTTCGCTCCCGGGTCGCCGGCGCCATCGCGGGCGAGGTGACGGATCGCGGGTGA
PROTEIN sequence
Length: 335
MYLQQRHYEQSATQSGEPASSPYRVDFPANTSHRAPVINSTPSSDIKLRRTASPVTPDTDKVAGEGCTSVRAFRLAYDGAPFHGFQRQPDVPTVEDALFDALCALGVCTDGPENYSAAGRTDAGVSAAAQTVAFDCPEWCGPAALNAELPESIRAWAAADVTDFHATHDARGREYVYVLPGVGLDDGRARETAGRLSGEHDFHNLTPDGTGTVRDVSVGLDRDGEFLAVTVRADGFPRQLVRRLVSLLRSVASGAAPLSKIGDVLGPDRIEGPEGVPPAPAYPLYLADVRYGLSFTVAPGAAADARKRFERRRTEHAVRSRVAGAIAGEVTDRG*