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sw_12_scaffold_1079

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1079_1
unknown

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3..83
DNA (81bp) protein (27aa)

This feature has no annotations

sw_12_scaffold_1079_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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142..735
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N582_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53067.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_1079_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

854..1315
DNA (462bp) protein (154aa)
inosine monophosphate dehydrogenase (EC:1.1.1.205)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1K8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29335.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_12_scaffold_1079_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1270..1677
DNA (408bp) protein (136aa)
CBS domain containing protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NP78_HALUD
CBS domain containing protein
CBS domain containing protein {ECO:0000313|EMBL:ACV11665.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_12_scaffold_1079_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1951..3591
DNA (1641bp) protein (547aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ELY33009.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ELY33009.1};; Glycyl-tRNA synthetase {ECO:0000313|EMBL:ADJ13516.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ADJ13516.1};; TaxID=79
Glycyl-tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4F4_HALJB
sw_12_scaffold_1079_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3599..4195
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3Y8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40123.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_1079_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4651..6663
DNA (2013bp) protein (671aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
sw_12_scaffold_1079_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6690..7715)
DNA (1026bp) protein (342aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ33282.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ33282.1};; SAI
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEW3_9EURY
phosphoribosylaminoimidazolesuccinocarboxamide synthase
sw_12_scaffold_1079_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7818..9293
DNA (1476bp) protein (492aa)
FO synthase subunit 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N781_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:EMA52979.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
FO synthase subunit 2
sw_12_scaffold_1079_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9657..10862)
DNA (1206bp) protein (402aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IEX3_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
sw_12_scaffold_1079_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11193..11849)
DNA (657bp) protein (219aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N532_9EURY
phospholactate guanylyltransferase
sw_12_scaffold_1079_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11944..12753)
DNA (810bp) protein (270aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLX1_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA46656.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
nolA_1; NADH dehydrogenase 32K chain-like protein
sw_12_scaffold_1079_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12994..13587
DNA (594bp) protein (198aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=795797 species="Archaea; Euryarchaeot
Probable thymidylate kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9H0_HALJB
sw_12_scaffold_1079_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13677..13994)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46652.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1079_15
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14232..14462)
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JW63_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36319.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_1079_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14666..15361
DNA (696bp) protein (232aa)
TrkA-N domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VUK2_HALJB
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY40652.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
TrkA-N domain-containing protein
sw_12_scaffold_1079_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15363..15593
DNA (231bp) protein (77aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9I0_HALJB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY40653.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ADJ14392.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
sw_12_scaffold_1079_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15680..16273)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49677.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_12_scaffold_1079_19
unknown

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comp(16400..16597)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_12_scaffold_1079_20
unknown

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comp(16690..16992)
DNA (303bp) protein (101aa)

This feature has no annotations

sw_12_scaffold_1079_21
unknown

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comp(16996..17223)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_12_scaffold_1079_22
unknown

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17671..18024
DNA (354bp) protein (118aa)

This feature has no annotations

sw_12_scaffold_1079_trna_1
unknown

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comp(18162..18246)
DNA (85bp)
transferRNA
sw_12_scaffold_1079_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18332..18805)
DNA (474bp) protein (158aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000313|EMBL:AEH36502.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AEH36502.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;"
Peptidylprolyl isomerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5S7_HALXS
sw_12_scaffold_1079_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18917..19453)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHC8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1079_25
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19815..21731
DNA (1917bp) protein (639aa)
mRNA 3-end processing factor-like protein n=2 Tax=Haloferax RepID=M0I9I9_9EURY
mRNA 3-end processing factor-like protein {ECO:0000313|EMBL:ELZ92697.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfu
epf1; mRNA 3-end processing factor-like protein
sw_12_scaffold_1079_26
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22066..22431
DNA (366bp) protein (122aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AAY8_9EURY
Methylglyoxal synthase {ECO:0000313|EMBL:GAD51928.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
Displaying 27 items

View Taxonomy