ggKbase home page

sw_12_scaffold_1139

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1139_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..465
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA44180.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_1139_2
unknown

Not on your lists

565..717
DNA (153bp) protein (51aa)

This feature has no annotations

sw_12_scaffold_1139_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

708..2201
DNA (1494bp) protein (498aa)
Replication factor A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEM9_9EURY
Replication factor A {ECO:0000313|EMBL:EMA44181.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
replication protein A
sw_12_scaffold_1139_4
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2387..2851
DNA (465bp) protein (155aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:EMA60714.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
sw_12_scaffold_1139_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2848..3939
DNA (1092bp) protein (364aa)
Histone deacetylase superfamily protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAK5_9EURY
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EMA41420.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
aup; acetoin utilization protein
sw_12_scaffold_1139_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3918..5312)
DNA (1395bp) protein (465aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264, ECO:0000313|EMBL:ELZ23336.1};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRN
CCA-adding enzyme n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJC1_9EURY
CCA-adding enzyme
sw_12_scaffold_1139_trna_1
unknown

Not on your lists

5428..5500
DNA (73bp)
transferRNA
sw_12_scaffold_1139_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5580..5999)
DNA (420bp) protein (140aa)
TrkA-N domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3M4_NATM8
trkA5; TrkA-N domain protein
TrkA-N domain protein {ECO:0000313|EMBL:CCQ37121.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_12_scaffold_1139_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6154..6720)
DNA (567bp) protein (189aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative membrane-bound metal-dependent hydrolase (DUF457)
sw_12_scaffold_1139_9
unknown

Not on your lists

comp(6883..7089)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_12_scaffold_1139_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7499..8125
DNA (627bp) protein (209aa)
DNA polymerase sliding clamp n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Z0_HALJB
proliferating cell nuclear antigen
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=795797 species="Archa
Displaying 11 items

View Taxonomy