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sw_12_scaffold_1250

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1250_1
unknown

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_12_scaffold_1250_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(248..814)
DNA (567bp) protein (189aa)
Signal transduction protein with CBS domains n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLX5_9EURY
Signal transduction protein with CBS domains {ECO:0000313|EMBL:ELZ24275.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
signal transduction protein with CBS domains
sw_12_scaffold_1250_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1077..1841)
DNA (765bp) protein (255aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase IIa (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV6_9EURY
sw_12_scaffold_1250_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1990..2988)
DNA (999bp) protein (333aa)
Methyltransferase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9L5_9EURY
Methyltransferase family protein {ECO:0000313|EMBL:EMA53345.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
hypothetical protein
sw_12_scaffold_1250_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2975..4144)
DNA (1170bp) protein (390aa)
Glycosyl transferase group 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRW4_9EURY
Glycosyl transferase group 1 {ECO:0000313|EMBL:EMA47200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
glycosyl transferase group 1
sw_12_scaffold_1250_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4141..4545)
DNA (405bp) protein (135aa)
6-pyruvoyltetrahydropterin synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9B4_HALJB
6-pyruvoyltetrahydropterin synthase
6-pyruvoyltetrahydropterin synthase {ECO:0000313|EMBL:ADJ16383.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
sw_12_scaffold_1250_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4664..5257)
DNA (594bp) protein (198aa)
Methyltransferase type 11 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WAJ7_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELY46474.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33
Methyltransferase type 11
sw_12_scaffold_1250_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5405..6382)
DNA (978bp) protein (326aa)
Putative zinc-binding dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6B2_9EURY
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:EMA53411.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
Alcohol dehydrogenase zinc-binding domain protein
sw_12_scaffold_1250_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6599..7315)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EDH2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44474.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_12_scaffold_1250_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7430..7750)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTD7_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48896.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_1250_11
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7916..8656
DNA (741bp) protein (247aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN1_9EURY
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_12_scaffold_1250_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8696..8923)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A342_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59753.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_1250_trna_1
unknown

Not on your lists

comp(9054..9137)
DNA (84bp)
transferRNA
sw_12_scaffold_1250_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9193..9921)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93064.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_1250_14
unknown

Not on your lists

10028..10228
DNA (201bp) protein (67aa)

This feature has no annotations

sw_12_scaffold_1250_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10380..10736)
DNA (357bp) protein (119aa)
Uncharacterized ACR n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6Z3_HALJB
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:ADJ15946.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY38042.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_12_scaffold_1250_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10985..11329
DNA (345bp) protein (115aa)
50S ribosomal protein L7Ae n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MX31_9EURY
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
rpl7ae; 50S ribosomal protein L7Ae
sw_12_scaffold_1250_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11316..11531
DNA (216bp) protein (72aa)
30S ribosomal protein S28e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A479_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
30S ribosomal protein S28e
sw_12_scaffold_1250_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11534..12226
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36460.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
50S ribosomal protein L24E
sw_12_scaffold_1250_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12256..12693
DNA (438bp) protein (146aa)
ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSS2_9EURY
sw_12_scaffold_1250_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12760..13503
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92395.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
anaerobic dehydrogenase cluster protein
sw_12_scaffold_1250_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13574..14200)
DNA (627bp) protein (209aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSI7_9EURY
molybdopterin-guanine dinucleotide biosynthesis protein A
sw_12_scaffold_1250_22
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14349..14558
DNA (210bp) protein (70aa)
Molybdenum-pterin binding protein n=2 Tax=Haloarcula RepID=Q5V437_HALMA
mop; molybdenum-pterin binding protein
Molybdenum-pterin binding protein {ECO:0000313|EMBL:AAV45715.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismo
sw_12_scaffold_1250_23
unknown

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comp(14772..14900)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 24 items

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