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sw_12_scaffold_1260

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1260_1
unknown

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comp(2..190)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_12_scaffold_1260_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(250..1032)
DNA (783bp) protein (261aa)
ABC transporter permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1X8_9EURY
ABC transporter permease {ECO:0000313|EMBL:EMA51881.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
sw_12_scaffold_1260_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1036..1959)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBQ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54100.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
sw_12_scaffold_1260_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1966..2847)
DNA (882bp) protein (294aa)
ABC transporter permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X8_9EURY
ABC transporter permease {ECO:0000313|EMBL:EMA41222.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
ABC transporter permease
sw_12_scaffold_1260_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2851..4047)
DNA (1197bp) protein (399aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T8_HALJB
nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein {ECO:0000313|EMBL:ADJ13429.1}; Nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like prot
sw_12_scaffold_1260_6
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4332..5261)
DNA (930bp) protein (310aa)
TRAP-type C4-dicarboxylate transport system large permease component n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9Q0_GRIHO
TRAP-type C4-dicarboxylate transport system large permease component {ECO:0000313|EMBL:EEY71765.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grim
TRAP dicarboxylate transporter subunit DctM
sw_12_scaffold_1260_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5333..5602)
DNA (270bp) protein (90aa)
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIH99981.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.
sw_12_scaffold_1260_8
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5602..6261)
DNA (660bp) protein (220aa)
Trap dicarboxylate transporter, dctq subunit n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CFU6_9RHOB
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIC42157.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp
Putative TRAP-type C4-dicarboxylate transport system, small permease component DctQ
sw_12_scaffold_1260_9
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6265..7455)
DNA (1191bp) protein (397aa)
Trap dicarboxylate transporter, dctp subunit n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CFU5_9RHOB
Trap dicarboxylate transporter, dctp subunit {ECO:0000313|EMBL:EFO33299.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source=
dctP1; TRAP transporter, subunit DctP
sw_12_scaffold_1260_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7963..9192)
DNA (1230bp) protein (410aa)
Mn2+ and Fe2+ transporter-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ52_9EURY
Mn2+ and Fe2+ transporter-like protein {ECO:0000313|EMBL:EMA44759.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
Mn2+/Fe2-transporter, NRAMP family
sw_12_scaffold_1260_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9510..10217
DNA (708bp) protein (236aa)
Resolvase domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9Y5_9EURY
Resolvase domain-containing protein {ECO:0000313|EMBL:EMA41220.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
site-specific recombinase, DNA invertase Pin
sw_12_scaffold_1260_trna_1
unknown

Not on your lists

10301..10374
DNA (74bp)
transferRNA
sw_12_scaffold_1260_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10596..11645)
DNA (1050bp) protein (350aa)
Universal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4F1_9EURY
Universal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein {ECO:0000313|EMBL:EJN60343.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
sw_12_scaffold_1260_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11772..13172)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZQY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY88925.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_12_scaffold_1260_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13315..14334)
DNA (1020bp) protein (340aa)
Signal peptide protein peptidase A n=1 Tax=Natronococcus occultus SP4 RepID=L0JU43_9EURY
signal peptide protein peptidase A
Signal peptide protein peptidase A {ECO:0000313|EMBL:AGB36537.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="N
sw_12_scaffold_1260_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14650..15546)
DNA (897bp) protein (299aa)
Phosphoserine phosphatase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJD7_HALMO
Phosphoserine phosphatase {ECO:0000313|EMBL:EMA44535.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 13
hypothetical protein
sw_12_scaffold_1260_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15901..16353
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03215.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_12_scaffold_1260_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16384..16536
DNA (153bp) protein (51aa)
Endoiii-related endonuclease n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQV6_HALBP
endoiii-related endonuclease
Endoiii-related endonuclease {ECO:0000313|EMBL:ELY24177.1}; Predicted endoIII-related endonuclease {ECO:0000313|EMBL:ADQ67903.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferaca
Displaying 18 items

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