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sw_12_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_136_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..739)
DNA (738bp) protein (246aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW9_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ67121.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY29669.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
sw_12_scaffold_136_2
unknown

Not on your lists

comp(982..1383)
DNA (402bp) protein (134aa)

This feature has no annotations

sw_12_scaffold_136_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1567..2415
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X271_9EURY
LPS:glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ELY55825.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
sw_12_scaffold_136_trna_1
unknown

Not on your lists

2780..2895
DNA (116bp)
transferRNA
sw_12_scaffold_136_4
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3195..3854)
DNA (660bp) protein (220aa)
Type i restriction-modification system methyltransferase subunit n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z2B4_9EURY
Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ELY80494.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" s
type i restriction-modification system methyltransferase subunit
sw_12_scaffold_136_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3929..4540)
DNA (612bp) protein (204aa)
Regulatory protein TetR n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC75_9EURY
Regulatory protein TetR {ECO:0000313|EMBL:EMA55547.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
regulatory protein TetR
sw_12_scaffold_136_6
unknown

Not on your lists

4752..5039
DNA (288bp) protein (96aa)

This feature has no annotations

sw_12_scaffold_136_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5465..6313
DNA (849bp) protein (283aa)
LPS:glycosyltransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0K428_9EURY
LPS:glycosyltransferase
LPS:glycosyltransferase {ECO:0000313|EMBL:AGB39285.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_136_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6422..7687)
DNA (1266bp) protein (422aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
putative ATP-grasp enzyme
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
sw_12_scaffold_136_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7882..8856
DNA (975bp) protein (325aa)
Short chain dehydrogenase/reductase family oxidoreductase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QUH8_9EURY
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:EFW92257.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;"
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_136_10
unknown

Not on your lists

comp(9257..9403)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_12_scaffold_136_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9400..11166)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1N3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50999.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_136_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11215..15219)
DNA (4005bp) protein (1335aa)
Uncharacterized protein n=3 Tax=Halococcus hamelinensis RepID=M0M074_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39217.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sialidase
sw_12_scaffold_136_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15556..15705)
DNA (150bp) protein (50aa)
UPF0391 membrane protein ZOD2009_18764 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY63_9EURY
UPF0391 membrane protein ZOD2009_18764 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
hypothetical protein
sw_12_scaffold_136_14
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16002..17288)
DNA (1287bp) protein (429aa)
Ribonuclease R n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B010_NATA1
Ribonuclease R {ECO:0000313|EMBL:ELZ03902.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / DSM
Exoribonuclease II
sw_12_scaffold_136_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17372..17674)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVW2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA49892.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_136_16
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17761..18240
DNA (480bp) protein (160aa)
Hypotheical conserved protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YSE2_9EURY
Hypotheical conserved protein {ECO:0000313|EMBL:GAD51667.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.
conserved protein with predicted RNA binding PUA domain
sw_12_scaffold_136_17
unknown

Not on your lists

comp(18400..18741)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_12_scaffold_136_18
unknown

Not on your lists

comp(18900..19622)
DNA (723bp) protein (241aa)

This feature has no annotations

sw_12_scaffold_136_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19619..20752)
DNA (1134bp) protein (378aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML98_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA46148.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
peptidase M29 aminopeptidase II
sw_12_scaffold_136_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20943..21461)
DNA (519bp) protein (173aa)
amzA; archaemetzincin (EC:3.4.-.-)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Archaemetzincin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY4_NATM8
sw_12_scaffold_136_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21501..21953
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VPH9_HALJB
hypothetical protein
UPF0146 protein HacjB3_13405 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
sw_12_scaffold_136_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21950..22834
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29595.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
HAD superfamily hydrolase
sw_12_scaffold_136_23
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23068..23790
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AB89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY94608.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
sw_12_scaffold_136_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24008..24673
DNA (666bp) protein (222aa)
F420-dependent NADP reductase (EC:1.-.-.-)
F420H2:NADP oxidoreductase {ECO:0000313|EMBL:CAI48469.1}; EC=1.6.99.- {ECO:0000313|EMBL:CAI48469.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
F420H2:NADP+ oxidoreductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITR4_NATPD
sw_12_scaffold_136_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24783..26414
DNA (1632bp) protein (544aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N888_9EURY
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:EMA54066.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
alpha,alpha-trehalose-phosphate synthase (UDP-forming)
sw_12_scaffold_136_26
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26601..26867)
DNA (267bp) protein (89aa)
Thioredoxin n=3 Tax=Haloarcula RepID=G0HQ76_HALHT
trxA2; thioredoxin
Thioredoxin {ECO:0000313|EMBL:AEM58186.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
sw_12_scaffold_136_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27055..27213
DNA (159bp) protein (53aa)
Preprotein translocase subunit SecG n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNC5_9EURY
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1227455 species="Archaea; Euryarcha
preprotein translocase subunit secG
sw_12_scaffold_136_28
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27291..27893
DNA (603bp) protein (201aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z4H0_9EURY
SNO glutamine amidotransferase
sw_12_scaffold_136_29
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27968..28420
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W410_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00842.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying items 1-30 of 35 in total

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