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sw_12_scaffold_1371

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1371_1
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79..609
DNA (531bp) protein (177aa)
PE_PGRS family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAR0_SORC5
PE-PGRS family protein
Uncharacterised protein {ECO:0000313|EMBL:CRG45923.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="M
sw_12_scaffold_1371_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(672..1769)
DNA (1098bp) protein (366aa)
Sarcosine oxidase (EC:1.5.3.1); K00301 sarcosine oxidase [EC:1.5.3.1] id=24615283 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
N-methyltryptophan oxidase {ECO:0000313|EMBL:ESP87175.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
glycine/D-amino acid oxidase, deaminating
sw_12_scaffold_1371_3

Not on your lists

comp(1798..2262)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MN74_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07222.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1371_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2343..2558)
DNA (216bp) protein (72aa)
Transcription regulator-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NED9_9EURY
Transcription regulator-like protein {ECO:0000313|EMBL:EMA55025.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
transcriptional regulator
sw_12_scaffold_1371_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2555..2968)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42770.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1371_6
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3188..5011)
DNA (1824bp) protein (608aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=797302 species="Archaea; Eurya
Arginine--tRNA ligase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE82_HALRX
arginyl-tRNA synthetase
sw_12_scaffold_1371_7
unknown

Not on your lists

comp(5334..5504)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_12_scaffold_1371_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5700..6818
DNA (1119bp) protein (373aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXU7_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ28041.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
amidohydrolase
sw_12_scaffold_1371_9

Not on your lists

6921..7388
DNA (468bp) protein (156aa)
Cupin domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6F3_9ARCH
Cupin domain protein {ECO:0000313|EMBL:ESS10438.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_12_scaffold_1371_10
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7550..8167
DNA (618bp) protein (206aa)
ADP-ribose pyrophosphatase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YEI5_9EURY
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:GAD52221.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
NUDIX hydrolase
sw_12_scaffold_1371_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8214..8684)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45213.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1371_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8895..10385
DNA (1491bp) protein (497aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
sw_12_scaffold_1371_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10584..11072
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_1371_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11283..12899
DNA (1617bp) protein (539aa)
tRNA-guanine transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLY7_9EURY
tRNA-guanine transglycosylase {ECO:0000313|EMBL:EMA46702.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
tRNA-guanine transglycosylase
sw_12_scaffold_1371_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13191..14222
DNA (1032bp) protein (344aa)
qor2; Zn-dependent oxidoreductase/NADPH2:quinone reductase (EC:1.6.5.5)
Zn-dependent oxidoreductase / NADPH2:quinone reductase {ECO:0000313|EMBL:AEM59271.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AEM59271.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Zn-dependent oxidoreductase / NADPH2:quinone reductase n=2 Tax=Haloarcula hispanica RepID=G0I050_HALHT
sw_12_scaffold_1371_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14332..15132)
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1H7_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ28522.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_1371_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15129..15710)
DNA (582bp) protein (194aa)
Galactonate dehydratase (EC:4.2.1.6)
Gluconate dehydratase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YW61_9EURY
Gluconate dehydratase {ECO:0000313|EMBL:GAD53027.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_12_scaffold_1371_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16378..16764)
DNA (387bp) protein (129aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV67_9EURY
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:EFW91585.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="H
dihydroxyacetone kinase phosphotransfer subunit
sw_12_scaffold_1371_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16765..17508)
DNA (744bp) protein (248aa)
Dihydroxyacetone kinase subunit DhaL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIX1_9EURY
Dihydroxyacetone kinase subunit DhaL {ECO:0000313|EMBL:EMA44674.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
dihydroxyacetone kinase
sw_12_scaffold_1371_20
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17636..18643)
DNA (1008bp) protein (336aa)
Dihydroxyacetone kinase subunit DhaK n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XA48_9EURY
Dihydroxyacetone kinase subunit DhaK {ECO:0000313|EMBL:ELY58585.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeo
dihydroxyacetone kinase subunit DhaK
sw_12_scaffold_1371_21
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18782..19510)
DNA (729bp) protein (243aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZY09_9EURY
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
phosphoglycerate mutase
sw_12_scaffold_1371_22
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20534..20899
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XDR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58773.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_12_scaffold_1371_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20976..21449)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36282.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
polyketide cyclase/dehydrase
sw_12_scaffold_1371_24
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21525..21755)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0HGD1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ82807.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_12_scaffold_1371_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21912..22139)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55965.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_1371_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22210..24204)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55084.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1371_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24374..25192
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A3U0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60078.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_1371_28
unknown

Not on your lists

comp(25339..25704)
DNA (366bp) protein (122aa)

This feature has no annotations

sw_12_scaffold_1371_29
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26091..26357)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0N4Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52922.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_12_scaffold_1371_30
unknown

Not on your lists

26536..26772
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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