ggKbase home page

sw_12_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_176_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J2ZJM0_9EURY
Adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:EJN60920.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salariu
sw_12_scaffold_176_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(264..1055)
DNA (792bp) protein (264aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
cobS; cobalamin 5-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=2 Tax=Haloferax RepID=M0GE71_HALL2
sw_12_scaffold_176_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1046..2164)
DNA (1119bp) protein (373aa)
cbiB; cobalamine biosynthesis protein (adenosylcobinamide-phosphate synthase CobD) (EC:6.3.1.10)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I592_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
sw_12_scaffold_176_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2161..2793)
DNA (633bp) protein (211aa)
HAD superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8V5_9EURY
HAD superfamily hydrolase {ECO:0000313|EMBL:ELZ30574.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
putative HAD superfamily hydrolase
sw_12_scaffold_176_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2881..4077)
DNA (1197bp) protein (399aa)
xaa-pro aminopeptidase id=24615945 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
xaa-pro aminopeptidase
sw_12_scaffold_176_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4190..4582
DNA (393bp) protein (131aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5F3_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ18445.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
alpha/beta hydrolase fold protein
sw_12_scaffold_176_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4572..4946
DNA (375bp) protein (125aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5F3_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ18445.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
sw_12_scaffold_176_trna_1
unknown

Not on your lists

comp(5026..5099)
DNA (74bp)
transferRNA
sw_12_scaffold_176_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5327..5866
DNA (540bp) protein (180aa)
CopG family transcriptional regulator n=1 Tax=Halomicrobium katesii RepID=UPI0003739053
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46304.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_176_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6097..6297
DNA (201bp) protein (67aa)
transcriptional regulator, CopG family
putative transcriptional regulator id=24650869 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ACV12573.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
sw_12_scaffold_176_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6300..7490
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Natronococcus occultus SP4 RepID=L0JY39_9EURY
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
sw_12_scaffold_176_11
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7699..8400)
DNA (702bp) protein (234aa)
PP-loop domain protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PMJ4_9EURY
PP-loop domain protein {ECO:0000313|EMBL:EMA71291.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
PP-loop domain protein
sw_12_scaffold_176_12
unknown

Not on your lists

9052..9396
DNA (345bp) protein (115aa)

This feature has no annotations

sw_12_scaffold_176_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9870..10796
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M265_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39917.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_176_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10806..11660)
DNA (855bp) protein (285aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBW2_9EURY
sw_12_scaffold_176_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12064..12882)
DNA (819bp) protein (273aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDB2_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA43338.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
sw_12_scaffold_176_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12961..13476)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41415.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_176_17

Not on your lists

14048..14695
DNA (648bp) protein (216aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX02_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS06778.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
N-acetyltransferase GCN5
sw_12_scaffold_176_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14757..15923)
DNA (1167bp) protein (389aa)
trpB2; probable tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Tryptophan synthase beta chain n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL30_NATM8
sw_12_scaffold_176_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16123..17034
DNA (912bp) protein (304aa)
pkn1; serine/threonine protein kinase (EC:2.7.11.1); K07179 RIO kinase 2 [EC:2.7.11.1] id=24644972 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Serine/threonine protein kinase {ECO:0000313|EMBL:ERH09188.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
serine/threonine protein kinase
sw_12_scaffold_176_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17399..18058)
DNA (660bp) protein (220aa)
DNA binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X1_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA53332.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
DNA binding protein
sw_12_scaffold_176_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18130..19221)
DNA (1092bp) protein (364aa)
(R)-citramalate synthase (EC:2.3.1.182)
Homocitrate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N624_9EURY
Homocitrate synthase {ECO:0000313|EMBL:EMA53331.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
sw_12_scaffold_176_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19222..20439)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EUE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57997.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
L-carnitine dehydratase/bile acid-inducible protein F
sw_12_scaffold_176_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20611..21243)
DNA (633bp) protein (211aa)
entB_3; homolog 1 to N-carbamoylsarcosine amidase (EC:3.5.1.59)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53329.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_176_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21295..23199)
DNA (1905bp) protein (635aa)
N-methylhydantoinase B 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Z4_9EURY
N-methylhydantoinase B 2 {ECO:0000313|EMBL:EMA53328.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
N-methylhydantoinase B 2
sw_12_scaffold_176_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23196..25259)
DNA (2064bp) protein (688aa)
N-methylhydantoinase A 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5W6_9EURY
N-methylhydantoinase A 2 {ECO:0000313|EMBL:EMA53327.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
N-methylhydantoinase A 2
sw_12_scaffold_176_26
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25465..25890)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WME7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50406.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
aromatic ring hydroxylating enzyme
sw_12_scaffold_176_27
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25893..26990)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50407.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
amidohydrolase family protein
sw_12_scaffold_176_28
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27231..28037
DNA (807bp) protein (269aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3I9_CONWI
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:GAF43147.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislav
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_176_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28051..28809)
DNA (759bp) protein (253aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWE6_9EURY
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFW91042.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy