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sw_12_scaffold_2488

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2488_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..431)
DNA (429bp) protein (143aa)
IclR-like transcriptional regulator n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NU84_HALBP
IclR-like transcriptional regulator
IclR-like transcriptional regulator {ECO:0000313|EMBL:ADQ68604.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_12_scaffold_2488_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(547..1194)
DNA (648bp) protein (216aa)
DNA binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJL7_9EURY
DNA binding protein {ECO:0000313|EMBL:ESP89953.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
DNA binding protein
sw_12_scaffold_2488_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1381..1617)
DNA (237bp) protein (79aa)
Pyridoxamine 5-phosphate oxidase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE49_9EURY
Pyridoxamine 5-phosphate oxidase family protein {ECO:0000313|EMBL:EMA56111.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
putative flavin-nucleotide-binding protein
sw_12_scaffold_2488_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1630..1842)
DNA (213bp) protein (71aa)
Pyridoxamine 5-phosphate oxidase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE49_9EURY
Pyridoxamine 5-phosphate oxidase family protein {ECO:0000313|EMBL:EMA56111.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
sw_12_scaffold_2488_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1971..2147)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9ULC0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY25522.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_12_scaffold_2488_6
unknown

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2375..2536
DNA (162bp) protein (54aa)

This feature has no annotations

sw_12_scaffold_2488_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2710..3126
DNA (417bp) protein (139aa)
Methylmalonyl-CoA mutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXY7_9EURY
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EMA49290.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
methylmalonyl-CoA mutase family protein
sw_12_scaffold_2488_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3123..4265
DNA (1143bp) protein (381aa)
argK; ArgK-type transport ATPase (EC:2.7.-.-)
ArgK-type transport ATPase n=3 Tax=Haloferax RepID=M0FU76_9EURY
Transport ATPase, component for LAO/AO transport systems {ECO:0000313|EMBL:ELZ20651.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" so
sw_12_scaffold_2488_9
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4505..4996)
DNA (492bp) protein (164aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Rhodococcus equi ATCC 33707 RepID=E9T770_COREQ
Uncharacterized protein {ECO:0000313|EMBL:KBZ59570.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
guanine deaminase
sw_12_scaffold_2488_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5202..5372)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPY9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10436.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_2488_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5369..5575)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIH9_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA32883.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_12_scaffold_2488_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5620..6651)
DNA (1032bp) protein (344aa)
Small GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIK2_9EURY
Small GTP-binding protein {ECO:0000313|EMBL:EMA45193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
GTP-binding protein RBG1/RBG2
sw_12_scaffold_2488_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6853..7062
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04012.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_12_scaffold_2488_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7396..7668)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J675_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15793.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_2488_15
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7918..8106
DNA (189bp) protein (63aa)
Ribosomal protein L44E n=2 Tax=Archaea RepID=U1NTZ6_9EURY
Ribosomal protein L44E {ECO:0000313|EMBL:ERH01121.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
rpl44e; 50S ribosomal protein L44e
sw_12_scaffold_2488_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8323..9123
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M442_HALMO
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA40466.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor 2, alpha subunit (eIF-2alpha)
sw_12_scaffold_2488_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9200..9382
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRD3_9EURY
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
nop10P; H/ACA RNA-protein complex component Nop10p
sw_12_scaffold_2488_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9386..9901
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ64_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01054.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_2488_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9841..10143
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25068.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
TIGR00162 family protein
sw_12_scaffold_2488_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10460..11542
DNA (1083bp) protein (361aa)
Subtilisin-like serine protease n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1U4_HALMT
aprE; subtilisin-like serine protease
Serine protease {ECO:0000313|EMBL:AHZ22392.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 33500
Displaying 20 items

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