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sw_12_scaffold_348

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_348_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

sw_12_scaffold_348_2
unknown

Not on your lists

comp(251..406)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_12_scaffold_348_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

433..1395
DNA (963bp) protein (321aa)
Ribose-5-phosphate isomerase A {ECO:0000313|EMBL:ELZ33883.1}; EC=5.3.1.6 {ECO:0000313|EMBL:ELZ33883.1};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
rpiA; ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGE4_9EURY
sw_12_scaffold_348_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1349..2158)
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAB8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA41549.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase
sw_12_scaffold_348_5
unknown

Not on your lists

comp(3103..3693)
DNA (591bp) protein (197aa)

This feature has no annotations

sw_12_scaffold_348_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3755..5200
DNA (1446bp) protein (482aa)
TrkA-N domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJS2_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:EMA44695.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
TrkA-N domain-containing protein
sw_12_scaffold_348_7
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5239..5562)
DNA (324bp) protein (108aa)
Putative PRC-barrel domain-containing protein n=2 Tax=Haloferax RepID=M0GG95_9EURY
putative PRC-barrel domain-containing protein
Putative PRC-barrel domain-containing protein {ECO:0000313|EMBL:ELZ93684.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_12_scaffold_348_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5771..8830
DNA (3060bp) protein (1020aa)
FAD-linked oxidase domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAC2_9EURY
FAD-linked oxidase domain-containing protein {ECO:0000313|EMBL:EMA41554.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
FAD-linked oxidase domain-containing protein
sw_12_scaffold_348_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8882..11179)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S272_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63469.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_12_scaffold_348_10
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11181..11720)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LU45_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58239.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_12_scaffold_348_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11993..12193)
DNA (201bp) protein (67aa)
hypothetical protein id=24616238 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87816.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_348_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12513..13064
DNA (552bp) protein (184aa)
Histidine triad protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAH3_HALJB
histidine triad protein
Histidine triad protein {ECO:0000313|EMBL:ADJ14695.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_348_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13115..14101
DNA (987bp) protein (329aa)
Cation diffusion facilitator family transporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3F6_HALMD
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV47628.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_12_scaffold_348_14
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14201..15175)
DNA (975bp) protein (325aa)
aryl-alcohol dehydrogenase (EC:1.1.1.91)
Aryl-alcohol dehydrogenase (NADP(+)) {ECO:0000313|EMBL:AEH37410.1}; EC=1.1.1.91 {ECO:0000313|EMBL:AEH37410.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
Aryl-alcohol dehydrogenase (NADP(+)) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3P2_HALXS
sw_12_scaffold_348_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15259..16311)
DNA (1053bp) protein (351aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMV6_HALBP
Sodium ABC transporter permease {ECO:0000313|EMBL:ELZ26471.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
sodium ABC transporter permease
sw_12_scaffold_348_16
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16304..17779)
DNA (1476bp) protein (492aa)
ABC-type transport system permease n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HCM4_9EURY
ABC-type transport system permease {ECO:0000313|EMBL:ELZ82270.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JC
natB; ABC-type transport system permease
sw_12_scaffold_348_17

Not on your lists

comp(17858..18883)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU96_9EURY
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ESS05095.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC-type multidrug transport system, ATPase component
sw_12_scaffold_348_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19144..19380)
DNA (237bp) protein (79aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL32_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ36986.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_12_scaffold_348_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19565..19972
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWK4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36480.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_348_20
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20168..20725)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BPY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12940.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_12_scaffold_348_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20905..23001
DNA (2097bp) protein (699aa)
Formate dehydrogenase subunit alpha n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2V6_HALJB
formate dehydrogenase subunit alpha
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ELY34918.1}; Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADJ15063.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halob
sw_12_scaffold_348_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23123..23989
DNA (867bp) protein (289aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPL8_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA46674.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
N-acetyltransferase GCN5
sw_12_scaffold_348_23
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24245..24685
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R6D8_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK19798.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_348_24
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24741..25085
DNA (345bp) protein (115aa)
MoaD family protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W466_9EURY
MoaD family protein {ECO:0000313|EMBL:ELY44255.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 1
MoaD family protein
sw_12_scaffold_348_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25087..25341
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58498.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_348_26
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25345..25701
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YDD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25154.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_12_scaffold_348_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25808..26185)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93626.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_348_28
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26278..26640
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY60487.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_12_scaffold_348_29
unknown

Not on your lists

comp(26709..26864)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 29 items

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