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sw_12_scaffold_353

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_353_1

Not on your lists

comp(3..554)
DNA (552bp) protein (184aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGP4_9ARCH
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AEN06435.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_353_2
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

710..817
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I0X7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90371.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_12_scaffold_353_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

886..1926
DNA (1041bp) protein (347aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSW8_HALMO
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EMA47530.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
alcohol dehydrogenase zinc-binding domain protein
sw_12_scaffold_353_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1928..2428
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36174.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_353_5
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2577..2963
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82812.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_12_scaffold_353_6
unknown

Not on your lists

comp(2985..3200)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_12_scaffold_353_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3253..4446
DNA (1194bp) protein (398aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY63_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA50667.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Mandelate racemase/muconate lactonizing protein
sw_12_scaffold_353_8
unknown

Not on your lists

4493..5302
DNA (810bp) protein (270aa)

This feature has no annotations

sw_12_scaffold_353_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5336..5575)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAA9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_12_scaffold_353_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5703..6614
DNA (912bp) protein (304aa)
hypothetical protein id=24613286 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP90222.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_353_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7307..9076)
DNA (1770bp) protein (590aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
pyruvate kinase
sw_12_scaffold_353_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9190..10623)
DNA (1434bp) protein (478aa)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
NAD-dependent aldehyde dehydrogenase
sw_12_scaffold_353_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10839..11921)
DNA (1083bp) protein (361aa)
TrmB family transcriptional regulator n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZJU8_9EURY
transcriptional regulator TrmB
TrmB family transcriptional regulator {ECO:0000313|EMBL:ELY85443.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensi
sw_12_scaffold_353_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12054..12359)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36451.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_353_15
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12430..12888)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST35_9EURY
transcription regulator
Transcription regulator {ECO:0000313|EMBL:ADE02148.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_12_scaffold_353_16
unknown

Not on your lists

13139..13342
DNA (204bp) protein (68aa)

This feature has no annotations

sw_12_scaffold_353_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13786..14895
DNA (1110bp) protein (370aa)
Peptidase M24 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XR63_9EURY
Peptidase M24 {ECO:0000313|EMBL:ELY63916.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
peptidase M24
sw_12_scaffold_353_18
unknown

Not on your lists

15102..15311
DNA (210bp) protein (70aa)

This feature has no annotations

sw_12_scaffold_353_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15545..16075)
DNA (531bp) protein (177aa)
Phosphotransferase system IIB component n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA53_9EURY
Phosphotransferase system IIB component {ECO:0000313|EMBL:EMA41285.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
phosphotransferase system IIB component
sw_12_scaffold_353_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16072..17778)
DNA (1707bp) protein (569aa)
ptsI; sugar phosphotransferase system (PTS) enzyme I (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=3 Tax=Halococcus hamelinensis RepID=M0M9G7_9EURY
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EMA41284.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
sw_12_scaffold_353_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17732..18085)
DNA (354bp) protein (118aa)
Phosphocarrier protein Hpr n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7A7_9EURY
Phosphocarrier protein Hpr {ECO:0000313|EMBL:EMA41283.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
ptsH1; phosphocarrier protein Hpr
sw_12_scaffold_353_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18085..18546)
DNA (462bp) protein (154aa)
Sugar hosphotransferase system IIA component n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M636_9EURY
Sugar hosphotransferase system IIA component {ECO:0000313|EMBL:EMA41282.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
sugar hosphotransferase system IIA component
sw_12_scaffold_353_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18650..18904)
DNA (255bp) protein (85aa)
ptsC; sugar phosphotransferase system IIC component (EC:2.7.1.69)
Sugar phosphotransferase system IIC component n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6E8_9EURY
Sugar phosphotransferase system IIC component {ECO:0000313|EMBL:EMA41281.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
sw_12_scaffold_353_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18901..19683)
DNA (783bp) protein (261aa)
Sugar phosphotransferase system IIC component n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6E8_9EURY
Sugar phosphotransferase system IIC component {ECO:0000313|EMBL:EMA41281.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
Phosphotransferase system, EIIC
sw_12_scaffold_353_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19888..20799)
DNA (912bp) protein (304aa)
1-phosphofructokinase n=3 Tax=Halococcus hamelinensis RepID=M0MA48_9EURY
1-phosphofructokinase {ECO:0000313|EMBL:EMA41280.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
1-phosphofructokinase
sw_12_scaffold_353_26
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20796..21575)
DNA (780bp) protein (260aa)
DeoR family transcriptional regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4W2_HALMT
deoR2; DeoR family transcriptional regulator
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:AHZ21369.1}; DeoR family transcriptional regulator {ECO:0000313|EMBL:AFK19272.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Ha
sw_12_scaffold_353_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21801..22766)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50818.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_353_28
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

22825..23397
DNA (573bp) protein (191aa)
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; TaxID=943118 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" sour
sw_12_scaffold_353_29
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23406..24464
DNA (1059bp) protein (353aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QQ89_9EURY
Cellulase M related protein {ECO:0000313|EMBL:ERH07812.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
Displaying 29 items

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