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sw_12_scaffold_3754

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_3754_1
Halomicroarcula pellucida, Halomicroarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..163)
DNA (162bp) protein (54aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1427151 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase n=1 Tax=Halomicroarcula pellucida RepID=L0N441_9EURY
DNA-directed RNA polymerase subunit B'
sw_12_scaffold_3754_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(305..700)
DNA (396bp) protein (132aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:AHG02776.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AHG02776.1};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
RNA polymerase beta subunit n=1 Tax=Halobacterium sp. DL1 RepID=G4IAE5_9EURY
DNA-directed RNA polymerase, beta subunit/140 kD subunit
sw_12_scaffold_3754_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(697..1461)
DNA (765bp) protein (255aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA63242.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA63242.1};; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit B n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DSA1_9EURY
RNA polymerase subunit beta
sw_12_scaffold_3754_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1802..2032)
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
DNA-directed RNA polymerase subunit H n=2 Tax=Halovivax RepID=L0I8G3_HALRX
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
sw_12_scaffold_3754_trna_2
unknown

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comp(2208..2280)
DNA (73bp)
transferRNA
sw_12_scaffold_3754_5
Coniosporium apollinis, Coniosporium, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(2383..2826)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:EON66582.1}; TaxID=1168221 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichi
sw_12_scaffold_3754_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2768..3748)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y0C1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48131.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_3754_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4414..4641)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43373.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_3754_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4989..5225)
DNA (237bp) protein (79aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=931277 species="Archaea; Euryarchae
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M2Q5_HALMO
sw_12_scaffold_3754_9
unknown

Not on your lists

5480..6088
DNA (609bp) protein (203aa)

This feature has no annotations

sw_12_scaffold_3754_10
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6227..7120
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI0003682394
sw_12_scaffold_3754_11
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7163..7600
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI0003682394
sw_12_scaffold_3754_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7827..8765
DNA (939bp) protein (313aa)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5W4_9EURY
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:ELZ30253.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
6-phosphogluconate dehydrogenase
sw_12_scaffold_3754_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8884..9465
DNA (582bp) protein (194aa)
Ferredoxin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6C5_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ30252.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
(2Fe-2S)-binding protein
sw_12_scaffold_3754_trna_1
unknown

Not on your lists

9521..9593
DNA (73bp)
transferRNA
Displaying 15 items

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