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sw_12_scaffold_434

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_434_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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541..1818
DNA (1278bp) protein (426aa)
Glycosyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXG6_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA49514.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
group 1 glycosyl transferase
sw_12_scaffold_434_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2557..4515
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVN1_9EURY
Serine protease halolysin R4 {ECO:0000313|EMBL:EMA52074.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
sw_12_scaffold_434_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4691..5422)
DNA (732bp) protein (244aa)
N-acetyltransferase GCN5 n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DXD6_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ39387.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM
N-acetyltransferase GCN5
sw_12_scaffold_434_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5434..5592)
DNA (159bp) protein (53aa)
Protein tyrosine phosphatase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C913_9EURY
Protein tyrosine phosphatase {ECO:0000313|EMBL:ELZ19725.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
sw_12_scaffold_434_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5731..7320)
DNA (1590bp) protein (530aa)
Sulfatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MTZ4_9EURY
Sulfatase {ECO:0000313|EMBL:EMA48239.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sulfatase
sw_12_scaffold_434_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7512..8153
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0K7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50210.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_434_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8249..9529)
DNA (1281bp) protein (427aa)
Putative MFS transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2V6_9EURY
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
putative MFS transporter
sw_12_scaffold_434_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9526..10140)
DNA (615bp) protein (205aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH1_HALMO
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA47526.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
acrR; DNA binding protein putative transcriptional regulator
sw_12_scaffold_434_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10472..10873
DNA (402bp) protein (134aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_12_scaffold_434_10
unknown

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10905..11762
DNA (858bp) protein (286aa)

This feature has no annotations

sw_12_scaffold_434_11
unknown

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comp(12253..12531)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_12_scaffold_434_12

Not on your lists

comp(13117..14151)
DNA (1035bp) protein (345aa)
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV-damage endonuclease {ECO:0000313|EMBL:ESS08491.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_12_scaffold_434_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14274..15020
DNA (747bp) protein (249aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA; proteasome alpha subunit (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJT1_9EURY
sw_12_scaffold_434_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15017..15775
DNA (759bp) protein (253aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P9_9EURY
sw_12_scaffold_434_15
unknown

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comp(15707..16000)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_12_scaffold_434_16
unknown

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16043..16345
DNA (303bp) protein (101aa)

This feature has no annotations

sw_12_scaffold_434_17
unknown

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16565..16798
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_434_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16802..17770
DNA (969bp) protein (323aa)
Amidase, hydantoinase/carbamoylase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J414_HALJB
amidase, hydantoinase/carbamoylase family protein
Amidase, hydantoinase/carbamoylase family protein {ECO:0000313|EMBL:ADJ15406.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sourc
sw_12_scaffold_434_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17840..19318)
DNA (1479bp) protein (493aa)
Aldehyde:ferredoxin oxidoreductase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NSZ2_9EURY
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:EMA59745.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolytic
aldehyde:ferredoxin oxidoreductase
Displaying 19 items

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