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sw_12_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_438_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..680
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QST9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92498.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_438_2
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

802..2013
DNA (1212bp) protein (404aa)
Bile acid-inducible L-carnitine dehydratase protein F n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AY53_NATA1
Bile acid-inducible L-carnitine dehydratase protein F {ECO:0000313|EMBL:ELZ03430.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natria
bile acid-inducible L-carnitine dehydratase protein F
sw_12_scaffold_438_3
unknown

Not on your lists

2219..2467
DNA (249bp) protein (83aa)

This feature has no annotations

sw_12_scaffold_438_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2657..3784
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0S5_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA51153.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
acyl-CoA dehydrogenase
sw_12_scaffold_438_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3797..4417
DNA (621bp) protein (207aa)
Phosphoglycolate phosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML27_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EMA45439.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
phosphoglycolate phosphatase
sw_12_scaffold_438_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4381..4821)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F5F3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55165.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_12_scaffold_438_7

Not on your lists

5083..5790
DNA (708bp) protein (236aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
PAS sensor histidine kinase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGT0_9ARCH
PAS sensor histidine kinase {ECO:0000313|EMBL:ESS07359.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_438_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6462..7622
DNA (1161bp) protein (387aa)
Pas domain s-box n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML44_9EURY
Pas domain s-box {ECO:0000313|EMBL:EMA46083.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
HTR-like protein
sw_12_scaffold_438_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7827..8315
DNA (489bp) protein (163aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N208_9EURY
sw_12_scaffold_438_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8312..8560
DNA (249bp) protein (83aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7U8_9EURY
sw_12_scaffold_438_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8680..9564)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJV8_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA45663.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_438_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9524..10300)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N486_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52686.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_438_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10479..11204)
DNA (726bp) protein (242aa)
Uridine phosphorylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y2_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ28164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
S-methyl-5-thioadenosine phosphorylase
sw_12_scaffold_438_14
unknown

Not on your lists

comp(11307..11648)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_12_scaffold_438_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12310..12864
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20205.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_438_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13035..13241)
DNA (207bp) protein (69aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7C1_9EURY
Proteasome-activating nucleotidase {ECO:0000313|EMBL:EMA53004.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thail
pan2; proteasome-activating nucleotidase
sw_12_scaffold_438_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13238..14188)
DNA (951bp) protein (317aa)
Proteasome-activating nucleotidase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVA1_HALVA
peptidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_12_scaffold_438_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14375..16165)
DNA (1791bp) protein (597aa)
Oligoendopeptidase F n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8Q3_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EMA53005.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1
oligoendopeptidase F
sw_12_scaffold_438_19
unknown

Not on your lists

16323..16742
DNA (420bp) protein (140aa)

This feature has no annotations

sw_12_scaffold_438_20
unknown

Not on your lists

comp(16568..17305)
DNA (738bp) protein (246aa)

This feature has no annotations

sw_12_scaffold_438_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17541..18191
DNA (651bp) protein (217aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R6_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA52188.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
sw_12_scaffold_438_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18305..18697
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58831.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_438_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19547..19804)
DNA (258bp) protein (86aa)
LD-carboxypeptidase id=24616751 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
LD-carboxypeptidase {ECO:0000313|EMBL:ESP87338.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
LD-carboxypeptidase
sw_12_scaffold_438_24
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19806..21113)
DNA (1308bp) protein (436aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=543526 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQH4_HALTV
sw_12_scaffold_438_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21283..21954)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_438_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22123..22485)
DNA (363bp) protein (121aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
sw_12_scaffold_438_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22586..22984)
DNA (399bp) protein (133aa)
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ERH09088.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
phzC; putative phenazine biosynthesis protein; K06998 id=24644875 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
phzF; phenazine biosynthetic protein
sw_12_scaffold_438_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23119..23559)
DNA (441bp) protein (147aa)
Phenazine biosynthesis-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K4A8_9EURY
Phenazine biosynthesis-like protein {ECO:0000313|EMBL:EMA14690.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinai
phzC; phenazine biosynthesis-like protein
sw_12_scaffold_438_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23625..24080)
DNA (456bp) protein (152aa)
30S ribosomal protein S19e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL1_NATPD
rps19R; 30S ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_12_scaffold_438_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24235..25263)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
Displaying items 1-30 of 46 in total

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