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sw_12_scaffold_4728

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_4728_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..587
DNA (585bp) protein (195aa)
Serine--pyruvate transaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH8_9EURY
Serine--pyruvate transaminase {ECO:0000313|EMBL:EMA44149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
sw_12_scaffold_4728_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(684..1043)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M059_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39046.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_4728_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1064..1339)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39047.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_4728_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1479..2759
DNA (1281bp) protein (427aa)
5'-nucleotidase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQP2_HALBP
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:ELY30239.1}; 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:ADQ66730.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria;
sw_12_scaffold_4728_5

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2922..3224
DNA (303bp) protein (101aa)
Universal stress protein family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDM9_9ARCH
Universal stress protein family {ECO:0000313|EMBL:ESS06099.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
UspA domain-containing protein
sw_12_scaffold_4728_6
unknown

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comp(3352..3537)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_12_scaffold_4728_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3876..4466
DNA (591bp) protein (197aa)
Peptide chain release factor 1 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VVD8_9EURY
Peptide chain release factor 1 {ECO:0000313|EMBL:ELY41135.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
eRF1 domain 2 protein
sw_12_scaffold_4728_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4735..5415)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
sw_12_scaffold_4728_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5484..5687
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG04313.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_12_scaffold_4728_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5645..5848
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ23778.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_12_scaffold_4728_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5878..6627)
DNA (750bp) protein (250aa)
ugpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_12_scaffold_4728_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6725..7057)
DNA (333bp) protein (111aa)
Sodium/proton antiporter, cpa1 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5E6_9EURY
Sodium/proton antiporter, cpa1 family protein {ECO:0000313|EMBL:EMA40623.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
kefC; potassium transport protein kefC
sw_12_scaffold_4728_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7141..8034)
DNA (894bp) protein (298aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND20_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA55756.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
sodium/proton antiporter, cpa1 family
sw_12_scaffold_4728_14
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8556..9563
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SVI9_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD05597.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_12_scaffold_4728_15

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comp(9657..10175)
DNA (519bp) protein (173aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XTC0_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS03376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
universal stress protein uspa-like protein
sw_12_scaffold_4728_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10335..10901
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37654.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
Displaying 16 items

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