ggKbase home page

sw_12_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_481_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQN7_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA47658.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_481_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(818..1258)
DNA (441bp) protein (147aa)
DNA binding domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA41532.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
sw_12_scaffold_481_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1677..2918
DNA (1242bp) protein (414aa)
Peptide chain release factor subunit 1 n=2 Tax=Haloquadratum walsbyi RepID=RF1_HALWD
erf1; peptide chain release factor 1
Peptide chain release factor subunit 1 {ECO:0000255|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000255|HAMAP-Rule:MF_00424}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacte
sw_12_scaffold_481_4
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3061..3447
DNA (387bp) protein (129aa)
UspA domain protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HD49_9EURY
UspA domain protein {ECO:0000313|EMBL:ELZ80989.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
universal stress protein UspA
sw_12_scaffold_481_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3717..4709
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55239.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_481_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4961..5896
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X2Z7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56080.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
sw_12_scaffold_481_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5977..6378)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55240.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_481_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6508..6762)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HEI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88498.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_481_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6841..7353)
DNA (513bp) protein (171aa)
Phosphatase, c-terminal domain of histone macro h2a1 like protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MGR6_HALMO
Phosphatase, c-terminal domain of histone macro h2a1 like protein {ECO:0000313|EMBL:EMA44523.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
putative phosphatase, C-terminal domain of histone macro H2A1 like protein
sw_12_scaffold_481_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7473..7601)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90970.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_12_scaffold_481_11
unknown

Not on your lists

7967..8227
DNA (261bp) protein (87aa)

This feature has no annotations

sw_12_scaffold_481_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8332..8988)
DNA (657bp) protein (219aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFP8_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EMA56671.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_12_scaffold_481_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8988..10337)
DNA (1350bp) protein (450aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFP8_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EMA56671.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_12_scaffold_481_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10411..11109)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93495.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_481_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11275..11721
DNA (447bp) protein (149aa)
ABC transporter periplasmic protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6B4_9EURY
ABC transporter periplasmic protein {ECO:0000313|EMBL:EMA52664.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
sw_12_scaffold_481_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11799..12887
DNA (1089bp) protein (363aa)
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPL3_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein {ECO:0000313|EMBL:EFW93496.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
ABC transporter periplasmic protein
sw_12_scaffold_481_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13011..13967
DNA (957bp) protein (319aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPL4_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I {ECO:0000313|EMBL:EFW93497.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
ABC transporter
sw_12_scaffold_481_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13964..15070
DNA (1107bp) protein (369aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N538_9EURY
ABC transporter {ECO:0000313|EMBL:EMA52663.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter
sw_12_scaffold_481_19
unknown

Not on your lists

comp(15097..15429)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_12_scaffold_481_20
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15529..15867)
DNA (339bp) protein (113aa)
cation transport ATPase n=1 Tax=Serinicoccus profundi RepID=UPI000255F8A9
Putative peptide transport system ATP-binding protein {ECO:0000313|EMBL:EGJ74927.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strept
hypothetical protein
sw_12_scaffold_481_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16371..17102)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52659.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_481_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17190..18815
DNA (1626bp) protein (542aa)
Gamma-glutamyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MS41_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:EMA47554.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
gamma-glutamyltransferase 2
sw_12_scaffold_481_23
unknown

Not on your lists

comp(18908..19231)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_12_scaffold_481_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19372..20610)
DNA (1239bp) protein (413aa)
glpA; glycerol-3-phosphate dehydrogenase subunit A (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Glycerol-3-phosphate dehydrogenase subunit A n=2 Tax=Haloarcula RepID=Q5V0Y0_HALMA
sw_12_scaffold_481_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20946..22136
DNA (1191bp) protein (397aa)
Cell division control protein 6-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW24_9EURY
Cell division control protein 6-like protein {ECO:0000313|EMBL:EMA48999.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
hypothetical protein
sw_12_scaffold_481_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22332..23939
DNA (1608bp) protein (536aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHX0_9EURY
sw_12_scaffold_481_27
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23940..25073
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLP7_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ67250.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sw_12_scaffold_481_28
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25345..26184)
DNA (840bp) protein (280aa)
Fructose/tagatose bisphosphate aldolase n=1 Tax=Halonotius sp. J07HN4 RepID=U1QK99_9EURY
Fructose/tagatose bisphosphate aldolase {ECO:0000313|EMBL:ERH05882.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp.
fructose-bisphosphate aldolase
sw_12_scaffold_481_29
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26430..27815)
DNA (1386bp) protein (462aa)
sn-glycerol-3-phosphate dehydrogenase subunit C n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3L9_9EURY
sn-glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:ELZ29443.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
glycerol 3-phosphate dehydrogenase (quinone) subunit c
sw_12_scaffold_481_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27949..29214)
DNA (1266bp) protein (422aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000313|EMBL:EMA49001.1}; EC=1.1.5.3 {ECO:0000313|EMBL:EMA49001.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTT2_9EURY
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit
Displaying items 1-30 of 32 in total

View Taxonomy