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sw_12_scaffold_487

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_487_1
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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569..679
DNA (111bp) protein (37aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAJ5_HALXS
sodium/calcium exchanger membrane protein
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AEH35800.1}; Flags: Precursor;; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source=
sw_12_scaffold_487_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(688..1536)
DNA (849bp) protein (283aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9E1_HALJB
sodium/calcium exchanger membrane subunit
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ADJ14353.1}; Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:ELY40616.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacte
sw_12_scaffold_487_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1783..2529)
DNA (747bp) protein (249aa)
Type 11 methyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0M3_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY55177.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
methylase involved in ubiquinone/menaquinone biosynthesis
sw_12_scaffold_487_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2533..3276)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZ33_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37570.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_487_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3350..4315)
DNA (966bp) protein (322aa)
NMT1/THI5 like domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9E0_HALJB
NMT1/THI5 like domain-containing protein
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ADJ14352.1}; NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:ELY40615.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobac
sw_12_scaffold_487_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4312..5301)
DNA (990bp) protein (330aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Natronococcus occultus SP4 RepID=L0JYV9_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:AGB37053.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; N
sw_12_scaffold_487_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5305..6207)
DNA (903bp) protein (301aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Natronococcus occultus SP4 RepID=L0JVI9_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:AGB37052.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; N
sw_12_scaffold_487_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6294..6686
DNA (393bp) protein (131aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTG0_NATM8
cupin 2 barrel domain protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CCQ37774.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_12_scaffold_487_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7321..9012)
DNA (1692bp) protein (564aa)
aor2; aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:CCQ37775.1}; EC=1.2.7.5 {ECO:0000313|EMBL:CCQ37775.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Aldehyde ferredoxin oxidoreductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLI4_NATM8
sw_12_scaffold_487_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9159..9584
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JI23_NATP1
putative ring-cleavage extradiol dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELY77261.1}; Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:AGB30493.1}; TaxID=797303 species="Archaea; Euryarchae
sw_12_scaffold_487_11
unknown

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9645..9866
DNA (222bp) protein (74aa)

This feature has no annotations

sw_12_scaffold_487_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9863..11032)
DNA (1170bp) protein (390aa)
fdh; formaldehyde dehydrogenase (EC:1.2.1.46); K00148 glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] id=24616335 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
adhC; formaldehyde dehydrogenase (EC:1.1.1.1)
Formaldehyde dehydrogenase {ECO:0000313|EMBL:ESP87727.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
sw_12_scaffold_487_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11810..12115
DNA (306bp) protein (102aa)
30S ribosomal protein S24e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTV3_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rps24e; 30S ribosomal protein S24e
sw_12_scaffold_487_14
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12192..13982
DNA (1791bp) protein (597aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT47_HALUD
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
sw_12_scaffold_487_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14233..14499
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55166.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_487_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14705..15055
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0H4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39176.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_487_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15136..15669
DNA (534bp) protein (178aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; N
Non-canonical purine NTP pyrophosphatase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7Y8_HALXS
sw_12_scaffold_487_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15972..16325
DNA (354bp) protein (118aa)
Transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MXU6_HALMO
Transcriptional regulator {ECO:0000313|EMBL:EMA49255.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 13
transcriptional regulator
sw_12_scaffold_487_19
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16328..16813)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22001.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_12_scaffold_487_20
unknown

Not on your lists

comp(16820..16936)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_12_scaffold_487_21
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(16933..18108)
DNA (1176bp) protein (392aa)
Sulfate transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA61_9EURY
Sulfate transporter {ECO:0000313|EMBL:EMA66449.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
sulfate transporter
sw_12_scaffold_487_22
unknown

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comp(18196..18402)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_12_scaffold_487_23

Not on your lists

comp(18542..19036)
DNA (495bp) protein (165aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000313|EMBL:AEN05477.1}; EC=3.6.3.31 {ECO:0000313|EMBL:AEN05477.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Polyamine-transporting ATPase n=1 Tax=halophilic archaeon DL31 RepID=G2MK55_9ARCH
Displaying 23 items

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