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sw_12_scaffold_6586

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_6586_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..255
DNA (255bp) protein (85aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSN0_HALBP
sulfite oxidase-like oxidoreductase
Sulfite oxidase {ECO:0000313|EMBL:ELZ22241.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_12_scaffold_6586_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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395..1210
DNA (816bp) protein (272aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRA8_9EURY
hisF; Imidazole glycerol phosphate synthase cyclase subunit
sw_12_scaffold_6586_3
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1280..1570)
DNA (291bp) protein (97aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261, ECO:0000313|EMBL:ELZ10441.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261, ECO:0000313|EMBL:ELZ10441.1};; TaxID=1227491 species=
DNA-directed RNA polymerase subunit L n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BHT0_9EURY
RNA polymerase dimerization
sw_12_scaffold_6586_4
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1677..1937)
DNA (261bp) protein (87aa)
TRK potassium uptake system protein TrkH n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPG9_9EURY
TRK potassium uptake system protein TrkH {ECO:0000313|EMBL:ELZ85653.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elong
trkH2; TRK potassium uptake system protein TrkH
sw_12_scaffold_6586_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3180..3890)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MKP4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90174.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_12_scaffold_6586_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4185..4448
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:AGB38748.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
sw_12_scaffold_6586_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4766..4930)
DNA (165bp) protein (55aa)
Protein translocase subunit SecY n=2 Tax=Halococcus RepID=M0MI78_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=122745
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
Displaying 7 items

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