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sw_12_scaffold_680

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_680_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..334)
DNA (333bp) protein (111aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIA3_9EURY
proteasome subunit beta
sw_12_scaffold_680_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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572..949
DNA (378bp) protein (126aa)
UPF0212 protein C474_02755 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFE5_9EURY
UPF0212 protein C474_02755 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
hypothetical protein
sw_12_scaffold_680_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1004..2296)
DNA (1293bp) protein (431aa)
Arabinose efflux permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME86_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:EMA44036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
arabinose efflux permease
sw_12_scaffold_680_trna_2
unknown

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comp(2735..2807)
DNA (73bp)
transferRNA
sw_12_scaffold_680_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2793..3158)
DNA (366bp) protein (122aa)
Twin arginine translocation system subunit TatA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKM7_NATM8
tatA1; twin arginine translocation system subunit TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
sw_12_scaffold_680_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3256..3729
DNA (474bp) protein (158aa)
Homolog to peroxiredoxin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQQ3_NATPD
peroxiredoxin-like protein
Homolog to peroxiredoxin {ECO:0000313|EMBL:CAI49541.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
sw_12_scaffold_680_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3831..4640
DNA (810bp) protein (270aa)
Metal dependent phosphohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFC1_9EURY
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EMA44033.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
metal dependent phosphohydrolase
sw_12_scaffold_680_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4956..6059
DNA (1104bp) protein (368aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
sw_12_scaffold_680_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6266..7021
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC-type transport system, permease protein
sw_12_scaffold_680_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7234..7746
DNA (513bp) protein (171aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
sw_12_scaffold_680_trna_1
unknown

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comp(8063..8133)
DNA (71bp)
transferRNA
sw_12_scaffold_680_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8270..8920)
DNA (651bp) protein (217aa)
Methyltransferase type 11 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P052_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA62904.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21
methyltransferase type 11
sw_12_scaffold_680_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9451..11103)
DNA (1653bp) protein (551aa)
Archaeal flagella assembly protein J n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAA4_9EURY
archaeal flagella assembly protein J
Archaeal flagella assembly protein J {ECO:0000313|EMBL:AGN02609.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_12_scaffold_680_12
unknown

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comp(11100..11471)
DNA (372bp) protein (124aa)

This feature has no annotations

sw_12_scaffold_680_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11468..13294)
DNA (1827bp) protein (609aa)
Type II secretion system protein E n=3 Tax=Halobiforma lacisalsi RepID=M0LU47_9EURY
Type II secretion system protein E {ECO:0000313|EMBL:EMA35919.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
type II secretion system protein E
sw_12_scaffold_680_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13569..14039
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92819.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_680_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14181..14864)
DNA (684bp) protein (228aa)
ABC transporter related protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVW9_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EFW91382.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
ABC transporter
sw_12_scaffold_680_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14984..17293)
DNA (2310bp) protein (770aa)
Permease n=3 Tax=Halococcus hamelinensis RepID=M0M187_9EURY
Permease {ECO:0000313|EMBL:EMA38379.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
lolC; putative (lipoprotein-releasing system) permease
Displaying 18 items

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