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sw_12_scaffold_778

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_778_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1670
DNA (1668bp) protein (556aa)
Pre-peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N504_9EURY
Pre-peptidase {ECO:0000313|EMBL:EMA52204.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
surface protein from Gram-positive cocci
sw_12_scaffold_778_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1824..2666)
DNA (843bp) protein (281aa)
PHP-associated domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFI1_9EURY
polymerase/histidinol phosphatase-like protein
PHP-associated domain containing protein {ECO:0000313|EMBL:ERJ06477.1}; Polymerase/histidinol phosphatase-like protein {ECO:0000313|EMBL:CCQ34358.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Hal
sw_12_scaffold_778_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2855..3292)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0B0_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NusG antitermination factor
sw_12_scaffold_778_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3294..3467)
DNA (174bp) protein (58aa)
sec61c; preprotein translocase Sec61 subunit gamma; K07342 protein transport protein SEC61 subunit gamma and related proteins id=24620965 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1238427 species="Archaea; Euryarchaeo
sec61c; preprotein translocase Sec61 subunit gamma
sw_12_scaffold_778_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3647..4795)
DNA (1149bp) protein (383aa)
Cell division protein FtsZ n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPE0_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
ftsZ3; cell division protein FtsZ
sw_12_scaffold_778_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4914..6272)
DNA (1359bp) protein (453aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
D-aminoacyl-tRNA deacylase
sw_12_scaffold_778_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6298..6498)
DNA (201bp) protein (67aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MME5_HALMO
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA45610.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_12_scaffold_778_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6495..7559)
DNA (1065bp) protein (355aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MME5_HALMO
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA45610.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium/calcium exchanger membrane region
sw_12_scaffold_778_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7680..8549
DNA (870bp) protein (290aa)
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1227455 species="Archaea; Eurya
Shikimate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM2_9EURY
sw_12_scaffold_778_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8575..9390
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51500.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_778_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9514..10359
DNA (846bp) protein (282aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT9_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA44931.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
sw_12_scaffold_778_12
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10478..10852)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YBH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY70981.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_12_scaffold_778_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11328..11780
DNA (453bp) protein (151aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYS4_9EURY
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EJN60587.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
Rieske iron-sulfur domain protein
sw_12_scaffold_778_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11813..12106)
DNA (294bp) protein (98aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0ML90_HALMO
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA46431.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon
sw_12_scaffold_778_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12300..13265
DNA (966bp) protein (322aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CCQ34564.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CCQ34564.1};; Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:ERJ06395.1}; EC
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLZ5_9EURY
sw_12_scaffold_778_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13485..13892)
DNA (408bp) protein (136aa)
N-6 DNA Methylase/Eco57I restriction endonuclease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJB3_9EURY
N-6 DNA Methylase/Eco57I restriction endonuclease {ECO:0000313|EMBL:ESP88009.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
putative restriction/modification enzyme
sw_12_scaffold_778_17
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14026..14748)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1NCQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH01005.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
putative restriction/modification enzyme
sw_12_scaffold_778_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14811..15230)
DNA (420bp) protein (140aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2V5_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EMA51449.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
sw_12_scaffold_778_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15385..15951
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_778_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16032..17030
DNA (999bp) protein (333aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Zinc-binding dehydrogenase family oxidoreductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSP3_9EURY
Zinc-binding dehydrogenase family oxidoreductase {ECO:0000313|EMBL:EMA36562.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
sw_12_scaffold_778_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17037..18137)
DNA (1101bp) protein (367aa)
NADH-dependent flavin oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M660_HALMO
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EMA40094.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
NADH-dependent flavin oxidoreductase
sw_12_scaffold_778_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18315..19481
DNA (1167bp) protein (389aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXC7_9EURY
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:EMA38096.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alpha/beta hydrolase fold-3 domain-containing protein
sw_12_scaffold_778_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19453..20514
DNA (1062bp) protein (354aa)
Major facilitator superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N847_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA53294.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
major facilitator superfamily transporter
sw_12_scaffold_778_24
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20546..20881)
DNA (336bp) protein (112aa)
Polysaccharide deacetylase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C7K5_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:ELZ19210.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM
putative xylanase/chitin deacetylase
Displaying 24 items

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