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sw_12_scaffold_782

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_782_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..514)
DNA (513bp) protein (171aa)
adh13; zinc-binding dehydrogenase (EC:1.1.1.1 1.6.5.5)
Zinc-binding dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAI1_9EURY
Zinc-binding dehydrogenase {ECO:0000313|EMBL:EMA17808.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica J
sw_12_scaffold_782_2

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664..3003
DNA (2340bp) protein (780aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase, NAD-dependent n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1D0_9ARCH
DNA ligase, NAD-dependent {ECO:0000313|EMBL:ESS06411.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_782_3

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comp(3103..3450)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V5A0H9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08855.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_12_scaffold_782_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3769..4434
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46018.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_782_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4467..5216
DNA (750bp) protein (250aa)
DtxR family iron (Metal) dependent repressor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK16_9EURY
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:EMA46017.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
DtxR family transcriptional regulator
sw_12_scaffold_782_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5368..6351
DNA (984bp) protein (328aa)
Divalent heavy-metal cations transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6X4_9EURY
Divalent heavy-metal cations transporter {ECO:0000313|EMBL:ELZ29904.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
divalent heavy-metal cations transporter
sw_12_scaffold_782_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6441..6608
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H8W1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87155.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_782_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6697..7542)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTC3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91852.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
abc25p; copper ABC transporter permease
sw_12_scaffold_782_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7539..8441)
DNA (903bp) protein (301aa)
Sulfate-transporting ATPase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J2F2_9EURY
Sulfate-transporting ATPase {ECO:0000313|EMBL:ESP89587.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
copper ABC transporter ATP-binding protein
sw_12_scaffold_782_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8732..10027
DNA (1296bp) protein (432aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF34_HALMO
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA44336.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
hypothetical protein
sw_12_scaffold_782_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10153..11349
DNA (1197bp) protein (399aa)
UvrABC system protein C n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WZ40_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1227499 species="A
excinuclease ABC subunit C
sw_12_scaffold_782_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11346..12035
DNA (690bp) protein (230aa)
UvrABC system protein C n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KFF5_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1227452 species="A
uvrC; excinuclease ABC subunit C
sw_12_scaffold_782_13
unknown

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12037..12180
DNA (144bp) protein (48aa)

This feature has no annotations

sw_12_scaffold_782_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12426..12800
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0X9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50340.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_782_15
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12883..13419
DNA (537bp) protein (179aa)
Band 7 protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DY15_9EURY
Band 7 protein {ECO:0000313|EMBL:CDK40270.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
stomatin family protein
Displaying 15 items

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