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sw_12_scaffold_842

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_842_trna_1
unknown

Not on your lists

comp(182..255)
DNA (74bp)
transferRNA
sw_12_scaffold_842_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(390..878)
DNA (489bp) protein (163aa)
Phage T7 F exclusion suppressor FxsA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1X3_9EURY
Phage T7 F exclusion suppressor FxsA {ECO:0000313|EMBL:EMA50705.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
fxsA; FxsA
sw_12_scaffold_842_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(997..1950)
DNA (954bp) protein (318aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=1227455 species="Archaea; Eury
GTP cyclohydrolase MptA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFV8_9EURY
hypothetical protein
sw_12_scaffold_842_3
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2208..3059
DNA (852bp) protein (284aa)
Putative circadian clock protein, KaiC n=1 Tax=Halobacterium sp. DL1 RepID=G4IF77_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:AHG04665.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
circadian clock protein KaiC
sw_12_scaffold_842_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3238..3939)
DNA (702bp) protein (234aa)
Plastocyanin n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRB0_HALBP
plastocyanin
Plastocyanin {ECO:0000313|EMBL:ADQ67951.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bor
sw_12_scaffold_842_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4030..4980
DNA (951bp) protein (317aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
apbA; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NED4_9EURY
sw_12_scaffold_842_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5054..6592)
DNA (1539bp) protein (513aa)
Arylsulfatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXV7_9EURY
Arylsulfatase {ECO:0000313|EMBL:EFW90658.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
arylsulfatase
sw_12_scaffold_842_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6753..7682
DNA (930bp) protein (310aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
periplasmic copper-binding protein
sw_12_scaffold_842_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7754..8884)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57702.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_842_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9085..9609
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53821.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_842_10
unknown

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comp(9955..10356)
DNA (402bp) protein (134aa)

This feature has no annotations

sw_12_scaffold_842_11
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10660..10959
DNA (300bp) protein (100aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE58727.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_12_scaffold_842_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11108..11455)
DNA (348bp) protein (116aa)
Nitrogen-fixing NifU domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVG4_HALMO
Nitrogen-fixing NifU domain-containing protein {ECO:0000313|EMBL:EMA48789.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
nitrogen-fixing NifU domain-containing protein
sw_12_scaffold_842_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11520..11858)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D2Y9_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH36138.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_12_scaffold_842_14
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11956..12573
DNA (618bp) protein (206aa)
GtrA family protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M266_9EURY
GtrA family protein {ECO:0000313|EMBL:EMA39473.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 1087
hypothetical protein
sw_12_scaffold_842_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12712..13398)
DNA (687bp) protein (229aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJF1_9EURY
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EMA45483.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
putative intracellular protease/amidase
sw_12_scaffold_842_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13499..13771
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92807.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_12_scaffold_842_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13993..16047
DNA (2055bp) protein (685aa)
Extracellular solute-binding protein family 5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSD3_HALUD
extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACV12020.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabd
sw_12_scaffold_842_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16250..17239
DNA (990bp) protein (330aa)
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein id=24614099 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ESP89397.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Cand
binding-protein-dependent transport systems inner membrane component rbh
sw_12_scaffold_842_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17239..18189
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HI15_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ESP89398.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Cand
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_842_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18268..19413
DNA (1146bp) protein (382aa)
Peptide ABC transporter ATPase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNB5_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ESP89399.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
peptide ABC transporter ATPase
sw_12_scaffold_842_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19386..19880
DNA (495bp) protein (165aa)
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein id=24614102 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ESP89400.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
peptide ABC transporter ATPase
sw_12_scaffold_842_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19855..20709
DNA (855bp) protein (285aa)
peptide ABC transporter ATPase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI000362DE27
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EFW92802.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
peptide ABC transporter ATPase
sw_12_scaffold_842_23
unknown

Not on your lists

20808..21227
DNA (420bp) protein (140aa)

This feature has no annotations

sw_12_scaffold_842_24
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

21224..22129
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9BYA8_CAPO3
Uncharacterized protein {ECO:0000313|EMBL:KJE88650.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
phospholipase B1, membrane-associated-like
sw_12_scaffold_842_25
Glycine max, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(22484..23440)
DNA (957bp) protein (319aa)
UPI0003DEB21D related cluster n=1 Tax=unknown RepID=UPI0003DEB21D
two-component response regulator ARR11-like; K14491 two-component response regulator ARR-B family
Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27670.1}; TaxID=3847 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons
Displaying 26 items

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