ggKbase home page

sw_12_scaffold_941

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_941_1
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
Aldo/keto reductase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M626_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA39830.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 1087
oxidoreductase, aryl-alcohol dehydrogenase like protein
sw_12_scaffold_941_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


383..1858
DNA (1476bp) protein (492aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=795797 species="Archaea; Euryarc
Proline--tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7U6_HALJB
sw_12_scaffold_941_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2066..6625
DNA (4560bp) protein (1520aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase, large subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N788_9EURY
Glutamate synthase, large subunit {ECO:0000313|EMBL:EMA53423.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
sw_12_scaffold_941_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6677..7735
DNA (1059bp) protein (353aa)
egsA; NAD(P)-dependent glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R2_9EURY
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
sw_12_scaffold_941_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8171..8764
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQS2_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ38626.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquich
alpha/beta hydrolase fold protein
sw_12_scaffold_941_6
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8761..9024)
DNA (264bp) protein (88aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALJ2_NATGS
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AFZ74763.1}; Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ELY73566.1}; TaxID=797304 species="Arch
sw_12_scaffold_941_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8978..10516)
DNA (1539bp) protein (513aa)
Prolyl oligopeptidase family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHA7_9EURY
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EMA44733.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
pop; prolyl oligopeptidase family protein
sw_12_scaffold_941_8
unknown

Not on your lists

10737..11042
DNA (306bp) protein (102aa)

This feature has no annotations

sw_12_scaffold_941_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11165..12097
DNA (933bp) protein (311aa)
PREDICTED: LOW QUALITY PROTEIN: dentin sialophosphoprotein n=1 Tax=Bos mutus RepID=UPI0003C034E9
Uncharacterized protein {ECO:0000313|EMBL:EZX15924.1}; Flags: Fragment;; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
cell wall surface adhesion protein
sw_12_scaffold_941_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12360..12593)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49412.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_941_trna_1
unknown

Not on your lists

12881..12966
DNA (86bp)
transferRNA
sw_12_scaffold_941_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13016..13540
DNA (525bp) protein (175aa)
30S ribosomal protein S13 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSK5_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
SSU ribosomal protein S13P
sw_12_scaffold_941_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13541..14068
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J328_HALJB
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccu
sw_12_scaffold_941_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14085..14486
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Halogranum salarium B-1 RepID=J3EW84_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:EJN59087.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogran
rps11P; 30S ribosomal protein S11
sw_12_scaffold_941_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14488..15270
DNA (783bp) protein (261aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE6_9EURY
sw_12_scaffold_941_trna_2
unknown

Not on your lists

15421..15505
DNA (85bp)
transferRNA
sw_12_scaffold_941_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15663..16034
DNA (372bp) protein (124aa)
50S ribosomal protein L18e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRS9_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl18A; 50S ribosomal protein L18e
sw_12_scaffold_941_16
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16077..16388
DNA (312bp) protein (104aa)
50S ribosomal protein L13 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L322_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
50S ribosomal protein L13
sw_12_scaffold_941_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16382..16777
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP64_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps9p; 30S ribosomal protein S9P
sw_12_scaffold_941_18
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16823..17017
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
DNA-directed RNA polymerase subunit N n=1 Tax=Halorubrum sp. T3 RepID=UPI000381A29B
DNA-directed RNA polymerase subunit N
sw_12_scaffold_941_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17014..17223
DNA (210bp) protein (70aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit K n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNG4_9EURY
DNA-directed RNA polymerase subunit K/omega
sw_12_scaffold_941_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17216..18427
DNA (1212bp) protein (404aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRT4_9EURY
sw_12_scaffold_941_21
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18432..19289
DNA (858bp) protein (286aa)
30S ribosomal protein S2 n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AUV3_NATA1
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="
30S ribosomal protein S2
sw_12_scaffold_941_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19596..21359
DNA (1764bp) protein (588aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=12
Mevalonate kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3V9_9EURY
mevalonate kinase
sw_12_scaffold_941_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21431..21760
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6F1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52275.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_941_24
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21957..22457
DNA (501bp) protein (167aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=1325472 species="Archaea; Euryarchaeota; Haloba
Putative hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=halophilic archaeon J07HX5 RepID=U1MIR3_9EURY
putative hydrolase of the metallo-beta-lactamase superfamily
Displaying 26 items

View Taxonomy