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sw_12_scaffold_1577_4

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: 1513..2070

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1132509 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 185.0
  • Bit_score: 220
  • Evalue 2.00e-54
2'-5' RNA ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Z9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 185.0
  • Bit_score: 220
  • Evalue 1.50e-54
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 204
  • Evalue 2.30e-50

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGCGCGCGTTCGTCAGCGTCGACCCCGAGGGACTCGAAGGCGAGATCGAAGCACTTCAGGGCGAGTTCGAGGACGTGGACGGGCTCGATTTCGTCGCTCCTGAGAGCGTCCACCTCACGCTCTTTTTTCTCGGTGAGATCGATAGCGAGGGCGATCGTCTCGAAGCAGTCACCGGCGCTATCGAGGAAGGCGTGAGCGAGAGCGACGTCTCGTCGTTCGAAGCGGCGTTCGGGGGGCTCGGGGTCTTCCCGAGTCGCGAGTACATCCGCGTGCTCTGGGTCGGAGTACGCGAGGGCAGCGAGAAACTGACCCGGCTACAGGAGCGAGTCGAAGGTCGTCTCACCGATCTCGGATTCGAGCCCGACGACCACGATTTCACCCCGCACGCGACGATCGCCCGGATGCGCCACGCCGGCGGGAAAGAACGCCTCCAGCGGAAGCTCGACGAACTCGATCCGACGCTGGGGACCGGAACGGTCGAGGCGGTCCACCTGACCGAGAGCACGCTCACCGGGGACGGCCCGGAGTACGAGACGGTAGAACAGTTCTCGCTATAG
PROTEIN sequence
Length: 186
MRAFVSVDPEGLEGEIEALQGEFEDVDGLDFVAPESVHLTLFFLGEIDSEGDRLEAVTGAIEEGVSESDVSSFEAAFGGLGVFPSREYIRVLWVGVREGSEKLTRLQERVEGRLTDLGFEPDDHDFTPHATIARMRHAGGKERLQRKLDELDPTLGTGTVEAVHLTESTLTGDGPEYETVEQFSL*