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sw_12_scaffold_1577

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1577_1
unknown

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comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

sw_12_scaffold_1577_2
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(275..586)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CLP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22809.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_12_scaffold_1577_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(592..1458)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42799.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
TPR repeat-containing protein
sw_12_scaffold_1577_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1513..2070
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1132509 species="A
2'-5' RNA ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Z9_9EURY
2'-5' RNA ligase
sw_12_scaffold_1577_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2165..2926
DNA (762bp) protein (254aa)
Metal transporter family GufA protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI1_9EURY
Metal transporter family GufA protein {ECO:0000313|EMBL:EMA55332.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
zinc/iron permease
sw_12_scaffold_1577_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3171..3323
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=2 Tax=Halobacteriaceae RepID=F8DBV1_HALXS
50S ribosomal protein L39
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629, ECO:0000313|EMBL:EMA34008.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
sw_12_scaffold_1577_7
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3323..3601
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9S2_HALRX
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM
sw_12_scaffold_1577_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3603..4268
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN11_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
sw_12_scaffold_1577_9
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4275..4616)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB54_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53468.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_12_scaffold_1577_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4613..4891)
DNA (279bp) protein (93aa)
transcriptional regulator id=24644090 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERH08321.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
sw_12_scaffold_1577_11
unknown

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5162..5338
DNA (177bp) protein (59aa)

This feature has no annotations

sw_12_scaffold_1577_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5292..5642
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MI06_HALMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA44354.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
Displaying 12 items

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