ggKbase home page

sw_12_scaffold_275_23

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: comp(22992..24086)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1132509 species="Archaea similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 369.0
  • Bit_score: 393
  • Evalue 2.60e-106
endA; tRNA-splicing endonuclease (EC:3.1.27.9) similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 368.0
  • Bit_score: 380
  • Evalue 4.60e-103
tRNA-splicing endonuclease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M811_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 369.0
  • Bit_score: 393
  • Evalue 1.90e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1095
ATGAACGGTTCCTCGGAGGACGGGGTCGTCCACGTCGGCGGGGACGCCCGCCAGCGCTTTCACGACTCGCGGGGGTATGGCGCGCCGACCGGCGCGGGAAACGACCTGTATCTCTCGCCGGTCGAGGCGGCCCATCTGCTCTACCGAGGCGATCTCGATGGCGTCAATGGGATGGGATTTAGGGACTTTCTCGCCGCGCGGGAACTCGGCGTGGAATTCCTGGTCTACAAAGACCTGCGCGAGCGGGGGTTTTACCTCTCGCCCGCGCGGAGAGACTGGCTCGACGAGTCGATCGCCCCTCGCGAGGACTTCGTTGTCTACCCCCGGGGGTCGGGGCCGTGGGACGGCGAGGTCAGGTACTATATGCGGTGTGTCGGCGAGCGCGATACCGTCCCCGCTGCGAACCTCGGGGAGGTAGTACTGGGCGTCGTCGACGAGGACGGCGATCTGTCCTACTTCGAGACGAGCCGGGTGGAGTTCGACGGCGAAACGACCGACGGCCCACCAGGAGGGCTCCGAGGGCGGCTGCTGAGCGATCGGGCGCTCGTTTCCGACCCACCGGCCGACCTCTACGAACAGGACTTCTACGGCCGGCCGCTGGAAGGGGCCGACGCGCTCGGGCTCTCGCTGGTCGAAGCCGCCTTCCTCGAACGTGTTGGATGTCTCTCGATCGACGGTACCGGGACGACCGAGGCAACGAACGCGACCGGCGCGACCGATCCCAACGCCGGGAAAGAACCGGAGAGCGAGGGATCGGTCGTCGAGCGCGGGCGAGCCGTCGAAGGCGAGCGGTTCGACCGCCGGCTTGCGGTCTACAGGGCGCTTCGGGAGGCGGGCGTCGTCCCGAAAACCGGCTTCAAGTTCGGTGCTGACTTCAGGACCTACAGTCACGTCGAGTCGGTCGATTCATTGGGGCACTCCGAACGCCTGGTTCGAGTCCTCCCCGCTGGGCACGTCTTCTCGCCGCGCGATCTCGCGCTCGACGTCCGGCTGGCCGGCGGCGTCCGCAAGGAGACGGTCTTCGCGCTCGTAGGAAGCGGAACGAACGGTGAGGAGGGCATCGAGTGGCTCTCGGTGACGCGACTGACACCCTGA
PROTEIN sequence
Length: 365
MNGSSEDGVVHVGGDARQRFHDSRGYGAPTGAGNDLYLSPVEAAHLLYRGDLDGVNGMGFRDFLAARELGVEFLVYKDLRERGFYLSPARRDWLDESIAPREDFVVYPRGSGPWDGEVRYYMRCVGERDTVPAANLGEVVLGVVDEDGDLSYFETSRVEFDGETTDGPPGGLRGRLLSDRALVSDPPADLYEQDFYGRPLEGADALGLSLVEAAFLERVGCLSIDGTGTTEATNATGATDPNAGKEPESEGSVVERGRAVEGERFDRRLAVYRALREAGVVPKTGFKFGADFRTYSHVESVDSLGHSERLVRVLPAGHVFSPRDLALDVRLAGGVRKETVFALVGSGTNGEEGIEWLSVTRLTP*