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sw_12_scaffold_275

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_275_1
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
UDP-glucose 4-epimerase n=2 Tax=Haloarcula hispanica RepID=G0HR15_HALHT
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AJF25820.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_12_scaffold_275_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

265..1140
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
htpX1; heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0Q6_9EURY
sw_12_scaffold_275_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1275..1880
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53764.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_275_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2086..3120
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N861_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA repair and recombination protein RadA
sw_12_scaffold_275_5
unknown

Not on your lists

comp(3251..3379)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_12_scaffold_275_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3592..4968
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Y2_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:EMA39790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
aldehyde dehydrogenase
sw_12_scaffold_275_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5103..5366)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44083.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_275_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5371..5874)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44083.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_275_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5952..7304)
DNA (1353bp) protein (451aa)
Propionate catabolism protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRV8_HALMO
Propionate catabolism protein {ECO:0000313|EMBL:EMA48361.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
propionate catabolism protein
sw_12_scaffold_275_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7429..9018
DNA (1590bp) protein (530aa)
Acetolactate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA31_9EURY
Acetolactate synthase {ECO:0000313|EMBL:EMA41479.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
acetolactate synthase
sw_12_scaffold_275_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9771..10736)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55204.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
succinylglutamate desuccinylase/aspartoacylase
sw_12_scaffold_275_12
unknown

Not on your lists

10908..11162
DNA (255bp) protein (85aa)

This feature has no annotations

sw_12_scaffold_275_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11203..11655)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K600_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39960.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_275_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11931..12743)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51846.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_275_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12834..14135)
DNA (1302bp) protein (434aa)
TrkA-C domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0I7_HALMD
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ACV46969.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (s
sw_12_scaffold_275_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14280..15245)
DNA (966bp) protein (322aa)
ddh; 2-D-hydroxyacid dehydrogenase (EC:1.1.1.-)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHY6_9EURY
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:ELZ35050.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
sw_12_scaffold_275_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15341..15712
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J734_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15987.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_275_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15803..17620)
DNA (1818bp) protein (606aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTH5_HALBP
phenylalanyl-tRNA synthetase subunit beta
sw_12_scaffold_275_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17620..19131)
DNA (1512bp) protein (504aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282, ECO:0000313|EMBL:ELY58810.1};; Phenylalanyl-tRNA synthetase alpha subunit {ECO
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XAQ6_9EURY
sw_12_scaffold_275_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19432..21156)
DNA (1725bp) protein (575aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227455 species="Archaea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL5_9EURY
sw_12_scaffold_275_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21700..22236
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_275_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22278..22982
DNA (705bp) protein (235aa)
Trans-aconitate 2-methyltransferase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8J3_9EURY
trans-aconitate 2-methyltransferase
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:AGN01838.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_12_scaffold_275_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22992..24086)
DNA (1095bp) protein (365aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1132509 species="Archaea
endA; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M811_9EURY
sw_12_scaffold_275_24
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24248..24919
DNA (672bp) protein (224aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Halonotius sp. J07HN4 RepID=U1PAU1_9EURY
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ERH07154.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
HAD-superfamily hydrolase
sw_12_scaffold_275_25
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25349..27730)
DNA (2382bp) protein (794aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3S3_HALJB
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AHG00568.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
sw_12_scaffold_275_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27818..29236)
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
putative efflux protein, MATE family
sw_12_scaffold_275_27
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29266..29880)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JWL2_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA51028.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
sw_12_scaffold_275_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29945..30265
DNA (321bp) protein (107aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lipA; lipoic acid synthetase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV42_HALMO
sw_12_scaffold_275_29
unknown

Not on your lists

30515..30595
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 29 items

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