ggKbase home page

sw_12_scaffold_372_22

Organism: SW_12_Halobacteriales_65_16

near complete RP 29 / 55 MC: 4 BSCG 25 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: 18899..19174

Top 3 Functional Annotations

Value Algorithm Source
Rhodopsin n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LTP2_HALLT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 85.0
  • Bit_score: 92
  • Evalue 1.70e-16
rhodopsin similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 85.0
  • Bit_score: 92
  • Evalue 4.80e-17
Rhodopsin {ECO:0000313|EMBL:ACM56176.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC 49239 / similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 85.0
  • Bit_score: 92
  • Evalue 2.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum lacusprofundi → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 276
ATGAACGTACTGAATTCGCTCGTCGGAACGGTCGCTCCCGTTTCCCTGCAACTGGAACCGTCGGTACGAGAAGCACTATCGAACCCGTTGCTCTCGAGTTCGCTGTGGATCATGATCGTGCTCATGGGCGTTGCCACGCTGTTGTTCGTCTATATGGGTCGGAACGTCGGGGACCCGCGCGTACAACTGATGTTCATCGCAACGATCGGCATCCCGGCCGTATCGATATCGAGCTACCTCGGACTCGCGAGCGGACTCACGATCGGCGTCGTCTAG
PROTEIN sequence
Length: 92
MNVLNSLVGTVAPVSLQLEPSVREALSNPLLSSSLWIMIVLMGVATLLFVYMGRNVGDPRVQLMFIATIGIPAVSISSYLGLASGLTIGVV*