ggKbase home page

sw_12_scaffold_372

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_372_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..342)
DNA (342bp) protein (114aa)
HTR-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KL09_HALAR
HTR-like protein {ECO:0000313|EMBL:EMA20864.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282
hypothetical protein
sw_12_scaffold_372_2
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

993..1664
DNA (672bp) protein (224aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BU53_9EURY
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ELZ14480.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salin
aor1; aldehyde ferredoxin oxidoreductase
sw_12_scaffold_372_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1648..2811
DNA (1164bp) protein (388aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XND0_9EURY
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:ELY62911.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JC
aldehyde:ferredoxin oxidoreductase
sw_12_scaffold_372_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2871..4034)
DNA (1164bp) protein (388aa)
Xanthine and Co dehydrogenase maturation factor n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBB2_HALJB
xanthine and Co dehydrogenase maturation factor
Xanthine and Co dehydrogenase maturation factor {ECO:0000313|EMBL:ADJ16565.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source=
sw_12_scaffold_372_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4201..5814)
DNA (1614bp) protein (538aa)
alkK_5; medium-chain-fatty-acid-CoA ligase (EC:6.2.1.-)
Acyl-CoA synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGC2_9EURY
Acyl-CoA synthetase {ECO:0000313|EMBL:EMA44756.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
sw_12_scaffold_372_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5945..6616)
DNA (672bp) protein (224aa)
O-methyltransferase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5Y3_9EURY
O-methyltransferase family protein {ECO:0000313|EMBL:EMA53291.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
O-methyltransferase family protein
sw_12_scaffold_372_7
unknown

Not on your lists

comp(6733..7146)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_12_scaffold_372_8
unknown

Not on your lists

comp(7133..7828)
DNA (696bp) protein (232aa)

This feature has no annotations

sw_12_scaffold_372_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7922..8962)
DNA (1041bp) protein (347aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH9_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EMA45187.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
molecular chaperone GroES
sw_12_scaffold_372_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9271..10212
DNA (942bp) protein (314aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6)
Glycerol dehydrogenase {ECO:0000313|EMBL:ADJ15486.1}; EC=1.1.1.6 {ECO:0000313|EMBL:ADJ15486.1};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkal
Glycerol dehydrogenase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J494_HALJB
sw_12_scaffold_372_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10312..11367
DNA (1056bp) protein (352aa)
amidohydrolase n=1 Tax=Halorubrum sp. T3 RepID=UPI000363C6A0
Amidohydrolase 2 {ECO:0000313|EMBL:ELZ38973.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
amidohydrolase
sw_12_scaffold_372_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11377..12267
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60559.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_372_13
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12371..12715)
DNA (345bp) protein (115aa)
Glycosyl transferase family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GTS9_HALVD
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:ELK54508.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB220
sw_12_scaffold_372_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12969..13553)
DNA (585bp) protein (195aa)
Glycosyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC20_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA43291.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
family 2 glycosyl transferase
sw_12_scaffold_372_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13640..14347)
DNA (708bp) protein (236aa)
Methyltransferase type 11 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVP5_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA49822.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
methylase
sw_12_scaffold_372_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14500..14814
DNA (315bp) protein (105aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
pcrB; (S)-3-O-geranylgeranylglyceryl phosphate synthase 1 (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N967_9EURY
sw_12_scaffold_372_17
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14903..15151
DNA (249bp) protein (83aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halonotius sp. J07HN6 RepID=U1NY36_9EURY
geranylgeranylglyceryl phosphate synthase
sw_12_scaffold_372_18
unknown

Not on your lists

comp(15300..15743)
DNA (444bp) protein (148aa)

This feature has no annotations

sw_12_scaffold_372_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16005..16292
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46746.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_372_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16415..17188
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37625.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_372_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17302..18603
DNA (1302bp) protein (434aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELY38079.1}; Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ADJ15983.1}; EC=6.1.1.12 {ECO:0000313|EMBL:ADJ15983.1};; TaxID=795797 species="Archaea; Euryarchaeota; Ha
Aspartate--tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J730_HALJB
sw_12_scaffold_372_22
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18899..19174
DNA (276bp) protein (92aa)
Rhodopsin n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LTP2_HALLT
rhodopsin
Rhodopsin {ECO:0000313|EMBL:ACM56176.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC 49239 /
sw_12_scaffold_372_23
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19204..19752
DNA (549bp) protein (183aa)
Halorhodopsin n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LEX3_9EURY
Halorhodopsin {ECO:0000313|EMBL:EMA32142.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hop; halorhodopsin
Displaying 23 items

View Taxonomy