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sw_12_scaffold_3682

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_3682_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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160..495
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ24380.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_12_scaffold_3682_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(544..912)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBW9_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29934.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_3682_trna_1
unknown

Not on your lists

1093..1177
DNA (85bp)
transferRNA
sw_12_scaffold_3682_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1196..1723
DNA (528bp) protein (176aa)
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
rps13p; 30S ribosomal protein S13
sw_12_scaffold_3682_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1723..2238
DNA (516bp) protein (172aa)
30S ribosomal protein S4 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJ97_HALVA
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rps4p; 30S ribosomal protein S4
sw_12_scaffold_3682_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2235..2624
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=8 Tax=Haloarcula RepID=RS11_HALMA
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
sw_12_scaffold_3682_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2628..3410
DNA (783bp) protein (261aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JHC6_HALVA
sw_12_scaffold_3682_trna_2
unknown

Not on your lists

3513..3597
DNA (85bp)
transferRNA
sw_12_scaffold_3682_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3622..3972
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=9 Tax=Haloarcula RepID=RL18E_HALMA
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
sw_12_scaffold_3682_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4169..4396
DNA (228bp) protein (76aa)
50S ribosomal protein L13Ae (L13p) id=24614042 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
50S ribosomal protein L13
sw_12_scaffold_3682_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4390..4788
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=9 Tax=Haloarcula RepID=RS9_HALMA
rps9p; 30S ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
sw_12_scaffold_3682_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4800..5000
DNA (201bp) protein (67aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=7 Tax=Haloarcula RepID=RPON_HALMA
sw_12_scaffold_3682_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4997..5176
DNA (180bp) protein (60aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit K n=9 Tax=Haloarcula RepID=RPOK_HALMA
sw_12_scaffold_3682_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5173..6378
DNA (1206bp) protein (402aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVG9_HALAR
enolase
sw_12_scaffold_3682_13
unknown

Not on your lists

6375..6446
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 15 items

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