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sw_12_scaffold_848

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_848_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
Succinate dehydrogenase subunit C n=4 Tax=Haloarcula RepID=Q5V349_HALMA
succinate dehydrogenase
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EMA30539.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
sw_12_scaffold_848_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(262..876)
DNA (615bp) protein (205aa)
DNA-3-methyladenine glycosylase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAG9_HALJP
alkA; DNA-3-methyladenine glycosylase
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EMA12477.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californi
sw_12_scaffold_848_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(878..1450)
DNA (573bp) protein (191aa)
cysE2; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBR0_HALJP
Serine acetyltransferase {ECO:0000313|EMBL:EMA30543.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
sw_12_scaffold_848_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1690..2178)
DNA (489bp) protein (163aa)
IS1341-type transposase ISNph22 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISE8_NATPD
IS1341-type transposase
IS1341-type transposase ISNph22 {ECO:0000313|EMBL:CAI48939.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_12_scaffold_848_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2178..2831)
DNA (654bp) protein (218aa)
Transposase, IS605 OrfB family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSR0_HALUD
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACV10721.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
sw_12_scaffold_848_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3026..4900
DNA (1875bp) protein (625aa)
fadB; 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KR82_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA22709.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
sw_12_scaffold_848_trna_1
unknown

Not on your lists

4966..5040
DNA (75bp)
transferRNA
sw_12_scaffold_848_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5088..5594)
DNA (507bp) protein (169aa)
PilT domain-containing protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JUD8_9EURY
PilT domain-containing protein {ECO:0000313|EMBL:EMA11290.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensi
twitching motility protein PilT
sw_12_scaffold_848_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5591..5947)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HZ94_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67558.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_12_scaffold_848_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6177..7358
DNA (1182bp) protein (394aa)
Glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMU9_9EURY
Glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase {ECO:0000313|EMBL:EMA22712.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarc
rffH2; glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase
sw_12_scaffold_848_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7492..7677
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAH4_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30547.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_848_trna_2
unknown

Not on your lists

comp(7957..8031)
DNA (75bp)
transferRNA
sw_12_scaffold_848_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8099..8275)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTC0_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA30384.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_12_scaffold_848_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8272..9123)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD59_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30384.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_848_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9173..10768)
DNA (1596bp) protein (532aa)
D-lactate dehydrogenase (EC:1.1.2.4)
Oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD1_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ25484.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_12_scaffold_848_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11071..12276)
DNA (1206bp) protein (402aa)
Oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD1_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ25484.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
D-lactate dehydrogenase
sw_12_scaffold_848_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12394..13509
DNA (1116bp) protein (372aa)
Branched-chain amino acid ABC transporter permease protein n=3 Tax=Haloarcula RepID=Q5V3U4_HALMA
livH-4; branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA12013.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
sw_12_scaffold_848_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13506..14774
DNA (1269bp) protein (423aa)
High-affinity branched-chain amino acid transport protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYT9_HALVA
High-affinity branched-chain amino acid transport protein {ECO:0000313|EMBL:EMA01901.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
livM; high-affinity branched-chain amino acid transport protein
sw_12_scaffold_848_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14780..15622
DNA (843bp) protein (281aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYG5_HALVA
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA01902.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livG4; branched-chain amino acid ABC transporter ATP-binding protein
sw_12_scaffold_848_18
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15619..16374
DNA (756bp) protein (252aa)
ABC transporter n=2 Tax=Haloarcula RepID=M0JWL4_9EURY
livF-4; branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AAV45811.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
sw_12_scaffold_848_19
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16389..17708)
DNA (1320bp) protein (440aa)
ABC-type branched-chain amino acid transport system, substrate-binding protein n=2 Tax=Haloarcula hispanica RepID=G0HR93_HALHT
branched-chain amino acid ABC transporter substrate-binding protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJF27009.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
sw_12_scaffold_848_20
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17783..18526)
DNA (744bp) protein (248aa)
thyX; thymidylate synthase ThyX (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=2 Tax=Haloarcula hispanica RepID=G0HTB3_HALHT
sw_12_scaffold_848_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18575..19264)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMZ4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10391.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_848_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19248..19832)
DNA (585bp) protein (195aa)
HoxA-like transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTR9_HALAR
HoxA-like transcriptional regulator {ECO:0000313|EMBL:EMA24323.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arge
hlx1; HoxA-like transcriptional regulator
sw_12_scaffold_848_23
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19990..20565
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVS4_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA24324.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
flavoprotein
sw_12_scaffold_848_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20615..21055
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A589_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN60623.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_848_25
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21086..22045)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KP33_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22683.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_12_scaffold_848_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22180..22791)
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halos
sodA; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB2_9EURY
sw_12_scaffold_848_27
unknown

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23120..23230
DNA (111bp) protein (37aa)

This feature has no annotations

sw_12_scaffold_848_28
unknown

Not on your lists

23356..23745
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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