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sw_12_scaffold_3423_1

Organism: SW_12_Haloarcula_65_14

partial RP 31 / 55 MC: 3 BSCG 22 / 51 MC: 2 ASCG 23 / 38 MC: 2
Location: 1..270

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUL8_HALBP similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 92.0
  • Bit_score: 113
  • Evalue 1.20e-22
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 92.0
  • Bit_score: 113
  • Evalue 3.40e-23
PAS domain S-box {ECO:0000313|EMBL:ADQ68738.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 92.0
  • Bit_score: 113
  • Evalue 1.70e-22

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Taxonomy

Halogeometricum borinquense → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 270
CCCGCCGAACTCCGCCGGCGCCGGCAGGTGACGCGCGCTGCCGCCGACCCACAGCGGATACAGCGGGAACTCCTGTCCAGGCTGACCGAGAAACAGCGGGGCGCACTCGAGGCGGCCTATCACAAGGGCTTCTTCGAGTGGCCACGAGACGCCGTGGGCGAGGACATCGCCGACTCGCTGGGGGTGGCGACCCCGACGTTCCATCAGCACTTACGGAAGGCCGAGGCGGAAGTCTTCGACGCGTTGCTCTCGACCGAGACGCCGTCGTAG
PROTEIN sequence
Length: 90
PAELRRRRQVTRAAADPQRIQRELLSRLTEKQRGALEAAYHKGFFEWPRDAVGEDIADSLGVATPTFHQHLRKAEAEVFDALLSTETPS*