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sw_12_scaffold_4010_1

Organism: SW_12_Viridiplantae_38_110

partial RP 9 / 55 BSCG 8 / 51 ASCG 0 / 38
Location: 2..790

Top 3 Functional Annotations

Value Algorithm Source
Photosystem II D2 protein (Fragment) n=2 Tax=Cyperoideae RepID=A0AS14_CYPPA similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 262.0
  • Bit_score: 527
  • Evalue 7.80e-147
Photosystem II D2 protein {ECO:0000256|RuleBase:RU004333}; Flags: Fragment;; TaxID=76434 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Lilio similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 262.0
  • Bit_score: 527
  • Evalue 1.10e-146
psbD2; photosystem II reaction center D2 protein similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 262.0
  • Bit_score: 509
  • Evalue 6.20e-142

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Taxonomy

Cyperus papyrus → Cyperus → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 789
TTCTTATGGGGTCCAGAAGCACAAGGAGAGTTTACTCGTTGGTGTCAAATAGGTGGTCTTTGGACATTTGTAGCATTACATGGTGCGTTTGCACTAATTGCTTTTATGCTACGTCAATTCGAAATTGCAAGAGCAGTTCAAATAAGACCATATAACGCAATAGCGTTTTCAGGTCCAATTGCTACCTTTGTTTCAGTTTTCCTAATTTACCCTTTAGGTCAACCAGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGGTATTTTCCGTTTTATCCTATTCTTCCAAGGATTCCATAACTGGACTTTAAACCCATTTCATATGATGGGTGTAGCAGGAATCTTAGGTGCAGCTTTATTATGTGCAATTCATGGAGCAACTGTAGAAAACACTATTTTCGAAGACGGTGATGGAGCAAACACATTCCGTGCGTTCAACCCAACACAAGCAGAAGAAACGTATTCAATGGTAACTGCGAACCGTTTCTGGTCACAAATTTTTGGTGTGGCTTTTTCTAACAAACGTTGGCTGCACTTCTTCATGTTATTTGTACCTGTAACAGGTTTATGGATGAGTTCAATTGGAGTAATAGGTTTAGCTCTAAACCTACGTGCATACGATTTCGTTTCACAAGAGATTAGAGCAGCTGAAGATCCAGAATTTGAAACTTTCTATACAAAAAACATCCTTTTAAATGAAGGTATTCGAGCTTGGATGGCGGCACAAGACCAGCCACATGAAAATCTAGTATTCCCTGAAGAGGTATTACCACGTGGAAACGCTTTATAA
PROTEIN sequence
Length: 263
FLWGPEAQGEFTRWCQIGGLWTFVALHGAFALIAFMLRQFEIARAVQIRPYNAIAFSGPIATFVSVFLIYPLGQPGWFFAPSFGVAGIFRFILFFQGFHNWTLNPFHMMGVAGILGAALLCAIHGATVENTIFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSSIGVIGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLVFPEEVLPRGNAL*