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sw_12_scaffold_4010

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_4010_1
Cyperus papyrus, Cyperus, Poales, commelinids, Streptophyta, Viridiplantae

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2..790
DNA (789bp) protein (263aa)
Photosystem II D2 protein (Fragment) n=2 Tax=Cyperoideae RepID=A0AS14_CYPPA
Photosystem II D2 protein {ECO:0000256|RuleBase:RU004333}; Flags: Fragment;; TaxID=76434 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Lilio
psbD2; photosystem II reaction center D2 protein
sw_12_scaffold_4010_2
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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774..2159
DNA (1386bp) protein (462aa)
Photosystem II CP43 protein n=1 Tax=Bathycoccus prasinos RepID=K8FE46_9CHLO
Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533}; PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496}; Protein CP-43 {ECO:0000256|HAMAP-Ru
photosystem II 44 kDa subunit reaction center protein
sw_12_scaffold_4010_trna_1
unknown

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2184..2270
DNA (87bp)
transferRNA
sw_12_scaffold_4010_3
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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comp(2330..3130)
DNA (801bp) protein (267aa)
Site-determining protein (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01DV1_OSTTA
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" sourc
septum site-determining protein MinD
sw_12_scaffold_4010_4
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

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3368..4015
DNA (648bp) protein (216aa)
Cytochrome b6 n=2 Tax=Ostreococcus tauri RepID=CYB6_OSTTA
Cytochrome b6 {ECO:0000255|HAMAP-Rule:MF_00633}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreo
cytochrome b subunit of the bc complex
sw_12_scaffold_4010_5
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

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4179..4661
DNA (483bp) protein (161aa)
Cytochrome b6-f complex subunit 4 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=E9NPX6_9CHLO
Cytochrome b6-f complex subunit 4 {ECO:0000256|HAMAP-Rule:MF_01344}; 17 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01344}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae
Cytochrome b6-f complex subunit 4
sw_12_scaffold_4010_6
unknown

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4673..4870
DNA (198bp) protein (66aa)

This feature has no annotations

sw_12_scaffold_4010_trna_2
unknown

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4856..4926
DNA (71bp)
transferRNA
sw_12_scaffold_4010_7
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

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4971..5345
DNA (375bp) protein (125aa)
Photosystem I assembly protein Ycf3 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWJ5_MONSK
Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Mon
photosystem I assembly protein Ycf3
sw_12_scaffold_4010_8
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5421..5699
DNA (279bp) protein (93aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VGP1_9CYAN
Photosystem I iron-sulfur center
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