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sw_12_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_15_1
unknown

Not on your lists

1..141
DNA (141bp) protein (47aa)

This feature has no annotations

sw_12_scaffold_15_2
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(115..2109)
DNA (1995bp) protein (665aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegl
NADH-ubiquinone oxidoreductase subunit L (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Naegleria gruberi RepID=Q9G8R5_NAEGR
sw_12_scaffold_15_3
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(2126..2602)
DNA (477bp) protein (159aa)
NADH-quinone oxidoreductase subunit I (EC:1.6.99.3)
NADH dehydrogenase subunit 8 n=1 Tax=Naegleria fowleri RepID=M4H6P9_NAEFO
NADH dehydrogenase subunit 8 {ECO:0000313|EMBL:AFP72304.1}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;
sw_12_scaffold_15_trna_20
unknown

Not on your lists

comp(2645..2718)
DNA (74bp)
transferRNA
sw_12_scaffold_15_trna_19
unknown

Not on your lists

comp(2762..2833)
DNA (72bp)
transferRNA
sw_12_scaffold_15_4
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(2868..3815)
DNA (948bp) protein (316aa)
Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Naegleria fowleri RepID=M4H678_NAEFO
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; Flags: Fragment;; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (
cytochrome c oxidase subunit III
sw_12_scaffold_15_5
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(3830..5935)
DNA (2106bp) protein (702aa)
NADH dehydrogenase subunit 11 {ECO:0000313|EMBL:AAG17786.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AAG17786.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" sourc
nuoG; NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit 11 n=1 Tax=Naegleria gruberi RepID=Q9G8R8_NAEGR
sw_12_scaffold_15_6
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(6043..6903)
DNA (861bp) protein (287aa)
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=5762 species="Eukaryota; Heterolobosea; Schi
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate:cytochrome c oxidoreductase subunit 2 n=1 Tax=Naegleria gruberi RepID=Q9G8R9_NAEGR
sw_12_scaffold_15_7
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(6968..7642)
DNA (675bp) protein (225aa)
Haem biosynthesis protein n=1 Tax=Naegleria gruberi RepID=Q9G8S0_NAEGR
Haem biosynthesis protein {ECO:0000313|EMBL:AAG17784.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
cytochrome-c oxidase assembly protein (coxG)
sw_12_scaffold_15_trna_18
unknown

Not on your lists

comp(7673..7746)
DNA (74bp)
transferRNA
sw_12_scaffold_15_8
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(7827..9713)
DNA (1887bp) protein (629aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;"
Cytochrome c oxidase subunit 1 n=1 Tax=Naegleria gruberi RepID=Q9G8S1_NAEGR
cytochrome C oxidase subunit I
sw_12_scaffold_15_9
unknown

Not on your lists

comp(10045..10326)
DNA (282bp) protein (94aa)

This feature has no annotations

sw_12_scaffold_15_trna_17
unknown

Not on your lists

comp(10361..10433)
DNA (73bp)
transferRNA
sw_12_scaffold_15_10
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(10460..10678)
DNA (219bp) protein (73aa)
ATP synthase subunit 9, mitochondrial n=1 Tax=Naegleria gruberi RepID=Q9G8N4_NAEGR
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
atpE; ATP synthase, F0 sector, c subunit
sw_12_scaffold_15_11
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(10788..11048)
DNA (261bp) protein (87aa)
NADH-ubiquinone oxidoreductase chain 4L {ECO:0000256|RuleBase:RU004419}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004419};; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naeg
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria fowleri RepID=M4H736_NAEFO
nuoK; NADH-quinone oxidoreductase subunit K
sw_12_scaffold_15_trna_16
unknown

Not on your lists

comp(11088..11157)
DNA (70bp)
transferRNA
sw_12_scaffold_15_12
unknown

Not on your lists

comp(11237..11551)
DNA (315bp) protein (105aa)

This feature has no annotations

sw_12_scaffold_15_13
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(11682..13379)
DNA (1698bp) protein (566aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Naegleria fowleri RepID=M4H5H9_NAEFO
ATP synthase subunit alpha {ECO:0000256|RuleBase:RU003551}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;
sw_12_scaffold_15_trna_15
unknown

Not on your lists

comp(13448..13521)
DNA (74bp)
transferRNA
sw_12_scaffold_15_trna_14
unknown

Not on your lists

comp(13618..13689)
DNA (72bp)
transferRNA
sw_12_scaffold_15_14
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(13706..14695)
DNA (990bp) protein (330aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegl
nuoH; NADH:ubiquinone oxidoreductase, membrane subunit H (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Naegleria gruberi RepID=Q9G8S8_NAEGR
sw_12_scaffold_15_trna_13
unknown

Not on your lists

comp(14731..14802)
DNA (72bp)
transferRNA
sw_12_scaffold_15_16S_1
unknown

Not on your lists

comp(17730..19308)
DNA (1579bp)
sw_12_scaffold_15_trna_12
unknown

Not on your lists

comp(19413..19485)
DNA (73bp)
transferRNA
sw_12_scaffold_15_15
unknown

Not on your lists

comp(19512..20351)
DNA (840bp) protein (280aa)

This feature has no annotations

sw_12_scaffold_15_16
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(20361..20948)
DNA (588bp) protein (196aa)
NADH dehydrogenase subunit 9 {ECO:0000313|EMBL:AAG17821.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AAG17821.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source
NADH/F420H2 dehydrogenase, subunit C (EC:1.6.5.3)
NADH dehydrogenase subunit 9 n=1 Tax=Naegleria gruberi RepID=Q9G8N3_NAEGR
sw_12_scaffold_15_trna_11
unknown

Not on your lists

comp(21138..21210)
DNA (73bp)
transferRNA
sw_12_scaffold_15_trna_10
unknown

Not on your lists

comp(21215..21286)
DNA (72bp)
transferRNA
sw_12_scaffold_15_17
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


comp(21333..21716)
DNA (384bp) protein (128aa)
Ribosomal protein S12 n=1 Tax=Naegleria gruberi RepID=Q9G8S2_NAEGR
Ribosomal protein S12 {ECO:0000313|EMBL:AAG17782.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
rpsL; 30S ribosomal protein S12
sw_12_scaffold_15_18
unknown

Not on your lists

comp(21717..22256)
DNA (540bp) protein (180aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

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