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sw_4_scaffold_1237

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1237_1
unknown

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comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_4_scaffold_1237_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(178..693)
DNA (516bp) protein (172aa)
nuoB; NADH-quinone oxidoreductase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=24657245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit B; EC=1.6.5.11;; NADH dehydrogenase I subunit B; NDH-1 subunit B; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nuoB; NADH-quinone oxidoreductase subunit B
sw_4_scaffold_1237_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(898..1269)
DNA (372bp) protein (124aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHE0_RHOMR
NAD(P)H-quinone oxidoreductase subunit 3
sw_4_scaffold_1237_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1665..2405)
DNA (741bp) protein (247aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYD_SALRD
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_1237_5].
aspS; aspartyl-tRNA synthetase
sw_4_scaffold_1237_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2402..3490)
DNA (1089bp) protein (363aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:CBH25100.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CBH25100.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
aspartyl-tRNA synthase n=1 Tax=Salisaeta longa RepID=UPI0003B2FD7F
aspS; aspartyl-tRNA synthetase
sw_4_scaffold_1237_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3753..5540)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25071.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_1237_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6039..6536
DNA (498bp) protein (166aa)
Transglutaminase-like enzyme, cysteine protease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC05_HALMO
Transglutaminase-like enzyme, cysteine protease {ECO:0000313|EMBL:EMA42189.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transglutaminase domain protein
sw_4_scaffold_1237_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6605..6898
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=2 Tax=Halococcus RepID=M0MEP2_9EURY
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
tif1; translation initiation factor aIF-1
sw_4_scaffold_1237_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7069..7371)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R664_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK19724.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_4_scaffold_1237_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7647..8546)
DNA (900bp) protein (300aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IAW3_9EURY
sw_4_scaffold_1237_11

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comp(8543..9421)
DNA (879bp) protein (293aa)
F420-0:gamma-glutamyl ligase n=1 Tax=halophilic archaeon DL31 RepID=G2MK65_9ARCH
F420-0:gamma-glutamyl ligase
F420-0:gamma-glutamyl ligase {ECO:0000313|EMBL:AEN05487.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 11 items

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