ggKbase home page

sw_4_scaffold_136

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_136_1
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists


comp(1..423)
DNA (423bp) protein (141aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=GWE2_Tenericutes_38_8_curated
DNA gyrase subunit A id=3651290 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
gyrA; DNA gyrase subunit A
sw_4_scaffold_136_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(420..968)
DNA (549bp) protein (183aa)
folA1; dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RBG_16_Pacearchaeota_35_8_curated
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase id=4010264 bin=PER_GWC2_41_7 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
sw_4_scaffold_136_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1039..1974)
DNA (936bp) protein (312aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; Tax
Thymidylate synthase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALG3_IGNAJ
thyA; thymidylate synthase
sw_4_scaffold_136_4
unknown

Not on your lists

comp(2195..2611)
DNA (417bp) protein (139aa)

This feature has no annotations

sw_4_scaffold_136_5
unknown

Not on your lists

comp(2568..2735)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_4_scaffold_136_6
unknown

Not on your lists

2818..3117
DNA (300bp) protein (100aa)

This feature has no annotations

sw_4_scaffold_136_7
unknown

Not on your lists

comp(3114..3791)
DNA (678bp) protein (226aa)

This feature has no annotations

sw_4_scaffold_136_8
unknown

Not on your lists

comp(3798..4421)
DNA (624bp) protein (208aa)

This feature has no annotations

sw_4_scaffold_136_9
unknown

Not on your lists

comp(4514..5116)
DNA (603bp) protein (201aa)

This feature has no annotations

sw_4_scaffold_136_10
unknown

Not on your lists

comp(5106..5399)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_4_scaffold_136_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(5371..6168)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3N2_9DELT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
sw_4_scaffold_136_12
unknown

Not on your lists

comp(6236..6628)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_4_scaffold_136_13
Epipogium aphyllum, Epipogium, Asparagales, Liliopsida, Streptophyta, Viridiplantae

Not on your lists

comp(6732..6968)
DNA (237bp) protein (79aa)
Translation initiation factor IF-1 n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LVS2_9FUSO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=449980 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida;
infA; translation initiation factor IF-1
sw_4_scaffold_136_14

Not on your lists

7082..8029
DNA (948bp) protein (316aa)
Predicted ATPase related to phosphate starvation-inducible protein PhoH n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RD47_THETN
Uncharacterized protein {ECO:0000313|EMBL:KKL60001.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase related to phosphate starvation-inducible protein PhoH
sw_4_scaffold_136_15
Oryza punctata, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(8079..8783)
DNA (705bp) protein (235aa)
PREDICTED: uncharacterized protein LOC101156289 n=1 Tax=Oryzias latipes RepID=UPI0002A483CD
Uncharacterized protein {ECO:0000313|EnsemblPlants:OPUNC11G15590.1}; TaxID=4537 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po
gvpT; gas vesicle protein T
sw_4_scaffold_136_16
Lactobacillus kunkeei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8786..11809)
DNA (3024bp) protein (1008aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1419324 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" s
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Enterococcus cecorum DSM 20682 = ATCC 43198 RepID=S1QYR8_9ENTE
sw_4_scaffold_136_17
unknown

Not on your lists

comp(11806..12264)
DNA (459bp) protein (153aa)

This feature has no annotations

sw_4_scaffold_136_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12274..12927)
DNA (654bp) protein (218aa)
DNA primase id=4084143 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA primase Tax=GWB1_Spirochaetes_59_5_curated
sw_4_scaffold_136_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12934..14385)
DNA (1452bp) protein (484aa)
Lipoprotein, putative id=2649172 bin=GWB1_Spirochaetes_59_5 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Lipoprotein, putative Tax=GWB1_Spirochaetes_59_5_curated
sw_4_scaffold_136_20
unknown

Not on your lists

comp(14396..15118)
DNA (723bp) protein (241aa)

This feature has no annotations

sw_4_scaffold_136_21
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15120..16841)
DNA (1722bp) protein (574aa)
SNF2 family protein (EC:3.6.1.-) Tax=GWB1_Spirochaetes_59_5_curated
SNF2 family protein id=4026560 bin=GWB1_Spirochaetes_59_5 species=Streptococcus constellatus genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
SNF2-like protein
sw_4_scaffold_136_22
unknown

Not on your lists

comp(16862..17506)
DNA (645bp) protein (215aa)

This feature has no annotations

sw_4_scaffold_136_23
unknown

Not on your lists

comp(17536..18069)
DNA (534bp) protein (178aa)

This feature has no annotations

sw_4_scaffold_136_24
unknown

Not on your lists

comp(18081..18845)
DNA (765bp) protein (255aa)

This feature has no annotations

sw_4_scaffold_136_25
unknown

Not on your lists

comp(18948..19175)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_4_scaffold_136_26
unknown

Not on your lists

comp(19436..20734)
DNA (1299bp) protein (433aa)

This feature has no annotations

Displaying 26 items

View Taxonomy